RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 SLC38A7Q9NVC3 462 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 USP15Q9Y4E8 981 aaPredicted RBP12.31□□□□□ -0.44
CDH3-206ENST00000567674 C5orf42Q9H799 3197 aa12.31□□□□□ -0.44
CDH3-206ENST00000567674 CFAP54Q96N23 3096 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.3□□□□□ -0.44
CDH3-206ENST00000567674 VWA3AA6NCI4 1184 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 E9PMD0 336 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 B4GALT5O43286 388 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 HIP1RO75146 1068 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 NPTXRO95502 500 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 URODP06132 367 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 MCF2P10911 925 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 PROZP22891 400 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 GRM5P41594 1212 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 OR1G1P47890 313 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 GLUD2P49448 558 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 STRN3Q13033 797 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 ATAT1Q5SQI0 421 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 KIAA1841Q6NSI8 718 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 MAEAQ7L5Y9 396 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 CABP7Q86V35 215 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 PRSS33Q8NF86 280 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 VN1R2Q8NFZ6 395 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 BSNDQ8WZ55 320 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
CDH3-206ENST00000567674 ACO2Q99798 780 aaKnown RBP12.3□□□□□ -0.44
CDH3-206ENST00000567674 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 NXF3Q9H4D5 531 aaKnown RBP12.3□□□□□ -0.44
CDH3-206ENST00000567674 SFXN1Q9H9B4 322 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 PLEKHA5Q9HAU0 1116 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 KMT5AQ9NQR1 393 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 PARP2Q9UGN5 583 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 ADAM28Q9UKQ2 775 aa12.3□□□□□ -0.44
CDH3-206ENST00000567674 BARX2Q9UMQ3 279 aaPredicted RBP12.3□□□□□ -0.44
CDH3-206ENST00000567674 SF3B1O75533 1304 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDH3-206ENST00000567674 K7ELQ4 463 aaPredicted RBP12.29□□□□□ -0.44
CDH3-206ENST00000567674 GFRA3O60609 400 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 TOM1L1O75674 476 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 PLA2G4BP0C869 781 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 MAPTP10636 758 aaKnown RBP12.29□□□□□ -0.44
CDH3-206ENST00000567674 KLRC2P26717 231 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 DDIT3P35638 169 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 PBX3P40426 434 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 SCNN1GP51170 649 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 CLCN4P51793 760 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 AFF1P51825 1210 aaKnown RBP12.29□□□□□ -0.44
CDH3-206ENST00000567674 ZNF131P52739 623 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 YARSP54577 528 aaKnown RBP12.29□□□□□ -0.44
CDH3-206ENST00000567674 PEX3P56589 373 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 MAPK7Q13164 816 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 HSP90AA2PQ14568 343 aaPredicted RBP12.29□□□□□ -0.44
CDH3-206ENST00000567674 TMEM132AQ24JP5 1023 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 DCLRE1AQ6PJP8 1040 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 ALKAL1Q6UXT8 129 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 ERMP1Q7Z2K6 904 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 TMEM173Q86WV6 379 aaPredicted RBP12.29□□□□□ -0.44
CDH3-206ENST00000567674 DAW1Q8N136 415 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 ZFP42Q96MM3 310 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 KLHL5Q96PQ7 755 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 CCDC94Q9BW85 323 aaPredicted RBP12.29□□□□□ -0.44
CDH3-206ENST00000567674 GBP3Q9H0R5 595 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 ST6GALNAC4Q9H4F1 302 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 MARCH5Q9NX47 278 aa12.29□□□□□ -0.44
CDH3-206ENST00000567674 SRPRBQ9Y5M8 271 aaKnown RBP12.29□□□□□ -0.44
CDH3-206ENST00000567674 CCDC169A6NNP5 214 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 TADA2AO75478 443 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 POU2F2P09086 479 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 CNPP09543 421 aaKnown RBP12.28□□□□□ -0.44
CDH3-206ENST00000567674 KCNE1P15382 129 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 SYT1P21579 422 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 AKAP5P24588 427 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 RPL9P32969 192 aaKnown RBP12.28□□□□□ -0.44
CDH3-206ENST00000567674 SF3A1Q15459 793 aaKnown RBP12.28□□□□□ -0.44
CDH3-206ENST00000567674 NAB2Q15742 525 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 NT5DC1Q5TFE4 455 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 ATL3Q6DD88 541 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 MPZL3Q6UWV2 235 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 RNF135Q8IUD6 432 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 ZDHHC14Q8IZN3 488 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 TMEM161BQ8NDZ6 487 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 BCL7CQ8WUZ0 217 aaPredicted RBP12.28□□□□□ -0.44
CDH3-206ENST00000567674 EDAQ92838 391 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 NXPE3Q969Y0 559 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 PNMA5Q96PV4 448 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 VN1R3Q9BXE9 311 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 OXCT2Q9BYC2 517 aaPredicted RBP12.28□□□□□ -0.44
CDH3-206ENST00000567674 MIOSQ9NXC5 875 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 ZDHHC7Q9NXF8 308 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 SNTG2Q9NY99 539 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 SEL1LQ9UBV2 794 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 STK17AQ9UEE5 414 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 CCDC39Q9UFE4 941 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 MAFFQ9ULX9 164 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 HES2Q9Y543 173 aa12.28□□□□□ -0.44
CDH3-206ENST00000567674 A0A087WWV3 80 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 RECQL4O94761 1208 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 PIGRP01833 764 aa12.27□□□□□ -0.45
CDH3-206ENST00000567674 CDC25AP30304 524 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms