RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 GNL2Q13823 731 aaKnown RBP16.88■□□□□ 0.29
CDR2-206ENST00000567406 USP41Q3LFD5 358 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 RTP2Q5QGT7 225 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 C15orf39Q6ZRI6 1047 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 FLCNQ8NFG4 579 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 FBXO18Q8NFZ0 1043 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 ERMNQ8TAM6 284 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 DEPTORQ8TB45 409 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 SMG7Q92540 1137 aaKnown RBP16.88■□□□□ 0.29
CDR2-206ENST00000567406 ATOH1Q92858 354 aaPredicted RBP16.88■□□□□ 0.29
CDR2-206ENST00000567406 ZNF707Q96C28 371 aaPredicted RBP16.88■□□□□ 0.29
CDR2-206ENST00000567406 MYADMQ96S97 322 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 KIF2CQ99661 725 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 PRRX2Q99811 253 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 MFSD1Q9H3U5 465 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 GDAQ9Y2T3 454 aa16.88■□□□□ 0.29
CDR2-206ENST00000567406 RECQL4O94761 1208 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 KIF4AO95239 1232 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 GBP2P32456 591 aaPredicted RBP16.87■□□□□ 0.29
CDR2-206ENST00000567406 HSP90AA2PQ14568 343 aaPredicted RBP16.87■□□□□ 0.29
CDR2-206ENST00000567406 MAPK6Q16659 721 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 FAM187BQ17R55 369 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 CEP57Q86XR8 500 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 FAM184AQ8NB25 1140 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 CMASQ8NFW8 434 aaPredicted RBP16.87■□□□□ 0.29
CDR2-206ENST00000567406 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 LLPHQ9BRT6 129 aaKnown RBP16.87■□□□□ 0.29
CDR2-206ENST00000567406 CCDC113Q9H0I3 377 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 BHMT2Q9H2M3 363 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 WDR6Q9NNW5 1121 aaKnown RBP16.87■□□□□ 0.29
CDR2-206ENST00000567406 KIAA1024Q9UPX6 916 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 ZFHX2Q9C0A1 2572 aaPredicted RBP16.87■□□□□ 0.29
CDR2-206ENST00000567406 VPS13AQ96RL7 3174 aa16.87■□□□□ 0.29
CDR2-206ENST00000567406 PP2D1A8MPX8 630 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 N4BP3O15049 544 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 PI15O43692 258 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 TOB1P50616 345 aaPredicted RBP16.86■□□□□ 0.29
CDR2-206ENST00000567406 TUSC3Q13454 348 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 TDGQ13569 410 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 NT5DC1Q5TFE4 455 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 ERICH6BQ5W0A0 696 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 ASTLQ6HA08 431 aaPredicted RBP16.86■□□□□ 0.29
CDR2-206ENST00000567406 NT5C3AQ9H0P0 336 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 C2orf40Q9H1Z8 148 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 PIDD1Q9HB75 910 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 LRWD1Q9UFC0 647 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 PCDHB6Q9Y5E3 794 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 CLUHO75153 1309 aa16.86■□□□□ 0.29
CDR2-206ENST00000567406 MTCL1Q9Y4B5 1905 aaKnown RBP16.86■□□□□ 0.29
CDR2-206ENST00000567406 CFAP54Q96N23 3096 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 ACKR2O00590 384 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 ADAM12O43184 909 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 GALR2O43603 387 aaPredicted RBP16.85■□□□□ 0.29
CDR2-206ENST00000567406 THP07101 528 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 NPR3P17342 541 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 CDC25AP30304 524 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 NAMPTP43490 491 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 RBM25P49756 843 aaKnown RBP16.85■□□□□ 0.29
CDR2-206ENST00000567406 NAB2Q15742 525 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 GLRA4Q5JXX5 417 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 FAM171A1Q5VUB5 890 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 CWF19L1Q69YN2 538 aaKnown RBP16.85■□□□□ 0.29
CDR2-206ENST00000567406 LILRA6Q6PI73 481 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 DDX19AQ9NUU7 478 aaKnown RBP16.85■□□□□ 0.29
CDR2-206ENST00000567406 FNIP2Q9P278 1114 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 FBXL21Q9UKT6 434 aa16.85■□□□□ 0.29
CDR2-206ENST00000567406 DOCK8Q8NF50 2099 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 E9PMD0 336 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 CFHP08603 1231 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDR2-206ENST00000567406 NTHL1P78549 312 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 PTGDRQ13258 359 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 IL17AQ16552 155 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 GET4Q7L5D6 327 aaPredicted RBP16.84■□□□□ 0.29
CDR2-206ENST00000567406 SIX5Q8N196 739 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 LNX1Q8TBB1 728 aaPredicted RBP16.84■□□□□ 0.29
CDR2-206ENST00000567406 SNX29Q8TEQ0 813 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 ZSCAN31Q96LW9 406 aaPredicted RBP16.84■□□□□ 0.29
CDR2-206ENST00000567406 CLSTN3Q9BQT9 956 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 ADPGKQ9BRR6 497 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 TTPALQ9BTX7 342 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.84■□□□□ 0.29
CDR2-206ENST00000567406 NOL7Q9UMY1 257 aaKnown RBP16.84■□□□□ 0.29
CDR2-206ENST00000567406 DUSP12Q9UNI6 340 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 SF3B1O75533 1304 aaKnown RBP eCLIP16.84■□□□□ 0.293e-6■■■■■ 137.9
CDR2-206ENST00000567406 TRIP11Q15643 1979 aa16.84■□□□□ 0.29
CDR2-206ENST00000567406 HMGN5P82970 282 aaKnown RBP16.83■□□□□ 0.28
CDR2-206ENST00000567406 ATF7IP2Q5U623 682 aa16.83■□□□□ 0.28
CDR2-206ENST00000567406 HAUS3Q68CZ6 603 aa16.83■□□□□ 0.28
CDR2-206ENST00000567406 CEP120Q8N960 986 aa16.83■□□□□ 0.28
CDR2-206ENST00000567406 IFT74Q96LB3 600 aa16.83■□□□□ 0.28
CDR2-206ENST00000567406 PRKD2Q9BZL6 878 aa16.83■□□□□ 0.28
CDR2-206ENST00000567406 PLEKHA4Q9H4M7 779 aa16.83■□□□□ 0.28
CDR2-206ENST00000567406 GOLGA2P5Q9HBQ8 144 aa16.83■□□□□ 0.28
CDR2-206ENST00000567406 DPP7Q9UHL4 492 aa16.83■□□□□ 0.28
CDR2-206ENST00000567406 VWA8A3KMH1 1905 aa16.82■□□□□ 0.28
CDR2-206ENST00000567406 CCDC169A6NNP5 214 aa16.82■□□□□ 0.28
CDR2-206ENST00000567406 I3L4J1 428 aa16.82■□□□□ 0.28
CDR2-206ENST00000567406 GFRA3O60609 400 aa16.82■□□□□ 0.28
CDR2-206ENST00000567406 EIF5BO60841 1220 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms