RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 THP07101 528 aa15.7■□□□□ 0.1
COMMD4-216ENST00000567023 SP100P23497 879 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-216ENST00000567023 ATP2C1P98194 919 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-216ENST00000567023 HSP90AA2PQ14568 343 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-216ENST00000567023 NAB2Q15742 525 aa15.7■□□□□ 0.1
COMMD4-216ENST00000567023 DCAF4L1Q3SXM0 396 aa15.7■□□□□ 0.1
COMMD4-216ENST00000567023 UBALD2Q8IYN6 164 aa15.7■□□□□ 0.1
COMMD4-216ENST00000567023 FEZF2Q8TBJ5 459 aa15.7■□□□□ 0.1
COMMD4-216ENST00000567023 MMTAG2Q9BU76 263 aaKnown RBP15.7■□□□□ 0.1
COMMD4-216ENST00000567023 C17orf75Q9HAS0 396 aa15.7■□□□□ 0.1
COMMD4-216ENST00000567023 UPF2Q9HAU5 1272 aaKnown RBP15.7■□□□□ 0.1
COMMD4-216ENST00000567023 SORCS3Q9UPU3 1222 aa15.7■□□□□ 0.1
COMMD4-216ENST00000567023 MYO10Q9HD67 2058 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 PP2D1A8MPX8 630 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 E9PMD0 336 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 K7ERI5 159 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 TADA2AO75478 443 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 CD2BP2O95400 341 aaKnown RBP15.69■□□□□ 0.1
COMMD4-216ENST00000567023 GLUD1P00367 558 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 NPTX2P47972 431 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 MTMR3Q13615 1198 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 HYIQ5T013 277 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 NT5DC1Q5TFE4 455 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 EEF1DP3Q658K8 133 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 LILRA6Q6PI73 481 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 ELMSAN1Q6PJG2 1045 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 C1orf186Q6ZWK4 172 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 DAW1Q8N136 415 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 FBXL6Q8N531 539 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 TDRD5Q8NAT2 981 aaKnown RBP15.69■□□□□ 0.1
COMMD4-216ENST00000567023 KREMEN2Q8NCW0 462 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 PAAF1Q9BRP4 392 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 NTPCRQ9BSD7 190 aaKnown RBP15.69■□□□□ 0.1
COMMD4-216ENST00000567023 KIFC3Q9BVG8 833 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 PLEKHA4Q9H4M7 779 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 TMEM134Q9H6X4 195 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 POLD4Q9HCU8 107 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 MAN1C1Q9NR34 630 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 USP20Q9Y2K6 914 aa15.69■□□□□ 0.1
COMMD4-216ENST00000567023 SF3B1O75533 1304 aaKnown RBP eCLIP15.68■□□□□ 0.1
COMMD4-216ENST00000567023 PHLPP2Q6ZVD8 1323 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 DENND4AQ7Z401 1863 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 GJB2P29033 226 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 CDC25AP30304 524 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 PEX3P56589 373 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 CREMQ03060 361 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 TMEM132AQ24JP5 1023 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 ATF7IP2Q5U623 682 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 ARL6IP4Q66PJ3 421 aaKnown RBP15.68■□□□□ 0.1
COMMD4-216ENST00000567023 MCTP1Q6DN14 999 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 RINT1Q6NUQ1 792 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 CCDC149Q6ZUS6 474 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 ZBTB33Q86T24 672 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 SUGP1Q8IWZ8 645 aaKnown RBP15.68■□□□□ 0.1
COMMD4-216ENST00000567023 ACSF2Q96CM8 615 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-216ENST00000567023 DRC1Q96MC2 740 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 TIPINQ9BVW5 301 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 PTPRHQ9HD43 1115 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 ARHGAP28Q9P2N2 729 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 LIMD1Q9UGP4 676 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 TNFSF13BQ9Y275 285 aa15.68■□□□□ 0.1
COMMD4-216ENST00000567023 RBM19Q9Y4C8 960 aaKnown RBP15.68■□□□□ 0.1
COMMD4-216ENST00000567023 CCDC195A0A1B0GUA6 201 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 CASTOR2A6NHX0 329 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 SPDYE4A6NLX3 237 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 TGM5O43548 720 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 BRD1O95696 1058 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 LIG1P18858 919 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 MAPK7Q13164 816 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 OTOP3Q7RTS5 596 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 KCNK18Q7Z418 384 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 APBB1IPQ7Z5R6 666 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-216ENST00000567023 RIN2Q8WYP3 895 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-216ENST00000567023 RABGGTAQ92696 567 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 B3GALT6Q96L58 329 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 ACO2Q99798 780 aaKnown RBP15.67■□□□□ 0.1
COMMD4-216ENST00000567023 PRRX2Q99811 253 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 RUSC1Q9BVN2 902 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 CXCL16Q9H2A7 254 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 CACNG4Q9UBN1 327 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 KCNG1Q9UIX4 513 aa15.67■□□□□ 0.1
COMMD4-216ENST00000567023 C2orf16Q68DN1 1984 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 PLXNA3P51805 1871 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 CCDC169A6NNP5 214 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 H3BQV1 296 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 TMEM189-UBE2V1I3L0A0 370 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 HIP1RO75146 1068 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 KIF4AO95239 1232 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 GUCY2CP25092 1073 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 NHLH1Q02575 133 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 ELAVL2Q12926 359 aaKnown RBP15.66■□□□□ 0.1
COMMD4-216ENST00000567023 DMP1Q13316 513 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-216ENST00000567023 XKR4Q5GH76 650 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 RTP2Q5QGT7 225 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 ALKAL1Q6UXT8 129 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 TAS1R3Q7RTX0 852 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 PALB2Q86YC2 1186 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 SYT2Q8N9I0 419 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-216ENST00000567023 PIK3R5Q8WYR1 880 aa15.66■□□□□ 0.1
COMMD4-216ENST00000567023 TBC1D32Q96NH3 1257 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms