RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SEC24CP53992 1094 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 PPP3CAQ08209 521 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 PRPF4BQ13523 1007 aaKnown RBP18.02■□□□□ 0.48
CMTM3-213ENST00000566756 PGM5Q15124 567 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 CYP1B1Q16678 543 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 ICE2Q659A1 982 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 PALB2Q86YC2 1186 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 FAM71AQ8IYT1 594 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 PGM2Q96G03 612 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 TMEM109Q9BVC6 243 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 PXMP2Q9NR77 195 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 SEPT11Q9NVA2 429 aaKnown RBP18.02■□□□□ 0.48
CMTM3-213ENST00000566756 CTTNBP2NLQ9P2B4 639 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 NOVA2Q9UNW9 492 aaKnown RBP18.02■□□□□ 0.48
CMTM3-213ENST00000566756 KCNH4Q9UQ05 1017 aa18.02■□□□□ 0.48
CMTM3-213ENST00000566756 IRF6O14896 467 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 LRRN2O75325 713 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 MRPS9P82933 396 aaKnown RBP18.02■□□□□ 0.47
CMTM3-213ENST00000566756 ODF2Q5BJF6 829 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 C1orf220Q5T0J3 134 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 CNKSR2Q8WXI2 1034 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 HVCN1Q96D96 273 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 RMDN3Q96TC7 470 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 PDCD2LQ9BRP1 358 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 ELP3Q9H9T3 547 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 ERVK-5Q9HDB9 667 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 KCNH7Q9NS40 1196 aa18.02■□□□□ 0.47
CMTM3-213ENST00000566756 UNCXA6NJT0 531 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 CCDC169A6NNP5 214 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 DHX15O43143 795 aaKnown RBP18.01■□□□□ 0.47
CMTM3-213ENST00000566756 RARRES1P49788 294 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 PEX5P50542 639 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 PMS2P54278 862 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 ENPEPQ07075 957 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 IFFO1Q0D2I5 559 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 PPIL2Q13356 520 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 BAATQ14032 418 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-213ENST00000566756 SEL1L2Q5TEA6 688 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 NSMFQ6X4W1 530 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 LBX2Q6XYB7 198 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 ARHGEF19Q8IW93 802 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 RPUSD2Q8IZ73 545 aaKnown RBP18.01■□□□□ 0.47
CMTM3-213ENST00000566756 IL31RAQ8NI17 732 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 SLC20A1Q8WUM9 679 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 P3H4Q92791 437 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 CD101Q93033 1021 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 ACAD9Q9H845 621 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 HSPBP1Q9NZL4 362 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 NOCTQ9UK39 431 aaKnown RBP18.01■□□□□ 0.47
CMTM3-213ENST00000566756 ATP8A1Q9Y2Q0 1164 aa18.01■□□□□ 0.47
CMTM3-213ENST00000566756 QARSP47897 775 aaKnown RBP18■□□□□ 0.47
CMTM3-213ENST00000566756 NCKAP1LP55160 1127 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 MAGOHP61326 146 aaKnown RBP18■□□□□ 0.47
CMTM3-213ENST00000566756 DLG4P78352 724 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 EAPPQ56P03 285 aaPredicted RBP18■□□□□ 0.47
CMTM3-213ENST00000566756 TREML2Q5T2D2 321 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 ZDHHC24Q6UX98 284 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 CHST13Q8NET6 341 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 EPS8L1Q8TE68 723 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 KAT2BQ92831 832 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 MAGOHBQ96A72 148 aaKnown RBP18■□□□□ 0.47
CMTM3-213ENST00000566756 EPB41L4BQ9H329 900 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 ACTR5Q9H9F9 607 aaPredicted RBP18■□□□□ 0.47
CMTM3-213ENST00000566756 PPANQ9NQ55 473 aaKnown RBP18■□□□□ 0.47
CMTM3-213ENST00000566756 TBC1D22BQ9NU19 505 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 MTRF1LQ9UGC7 380 aaKnown RBP18■□□□□ 0.47
CMTM3-213ENST00000566756 MXI1P50539 228 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 ARHGEF16Q5VV41 709 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 PRELID2Q8N945 189 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 RDH13Q8NBN7 331 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 CLMNQ96JQ2 1002 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 AGO4Q9HCK5 861 aaKnown RBP18■□□□□ 0.47
CMTM3-213ENST00000566756 BCCIPQ9P287 314 aaKnown RBP eCLIP18■□□□□ 0.47
CMTM3-213ENST00000566756 UVRAGQ9P2Y5 699 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 CNOT8Q9UFF9 292 aaKnown RBP18■□□□□ 0.47
CMTM3-213ENST00000566756 EXOC7Q9UPT5 735 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 COQ4Q9Y3A0 265 aa18■□□□□ 0.47
CMTM3-213ENST00000566756 LCTP09848 1927 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 KIAA1217Q5T5P2 1943 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 MAFGO15525 162 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 CYP1A2P05177 515 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 MFAP3P55082 362 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 ZNF211Q13398 564 aaPredicted RBP17.99■□□□□ 0.47
CMTM3-213ENST00000566756 TTLL12Q14166 644 aaPredicted RBP17.99■□□□□ 0.47
CMTM3-213ENST00000566756 LDLRAD1Q5T700 205 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 DENND2CQ68D51 928 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 CYFIP1Q7L576 1253 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 HAUS6Q7Z4H7 955 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 TAX1BP1Q86VP1 789 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 C4orf19Q8IY42 314 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 C12orf50Q8NA57 414 aaPredicted RBP17.99■□□□□ 0.47
CMTM3-213ENST00000566756 SHC3Q92529 594 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 OTUD5Q96G74 571 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 CBWD1Q9BRT8 395 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 GRHL1Q9NZI5 618 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 GTF3C4Q9UKN8 822 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 MTUS1Q9ULD2 1270 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 PCDHA3Q9Y5H8 950 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 CHRNB2P17787 502 aa17.99■□□□□ 0.47
CMTM3-213ENST00000566756 EIF2AK2P19525 551 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms