RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 AKT3Q9Y243 479 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 COL4A3BPQ9Y5P4 624 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 SLC12A7Q9Y666 1083 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 SMCO2A6NFE2 343 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 ARL5CA6NH57 179 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 N4BP3O15049 544 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 MSH4O15457 936 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 B4GALT3O60512 393 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 CFHP08603 1231 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 CSTF1Q05048 431 aaKnown RBP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 DMWDQ09019 674 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 SMARCB1Q12824 385 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 EPHA7Q15375 998 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 SLC27A1Q6PCB7 646 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 ANKS3Q6ZW76 656 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 CACNA2D4Q7Z3S7 1137 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 FERMT3Q86UX7 667 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 REXO1Q8N1G1 1221 aaKnown RBP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 CACTIN-AS1Q8N1I8 211 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 CLSTN3Q9BQT9 956 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 C2orf40Q9H1Z8 148 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 SUCLA2Q9P2R7 463 aaPredicted RBP6.85□□□□□ -1.31
UBE3A-205ENST00000566215 VAV3Q9UKW4 847 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 ADAMTS20P59510 1910 aa6.85□□□□□ -1.31
UBE3A-205ENST00000566215 ZNF292O60281 2723 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 FAM170BA6NMN3 283 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 H7C4K7 107 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 PTPN2P17706 415 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 NAPAP54920 295 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 TYW1BQ6NUM6 668 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 CWC27Q6UX04 472 aaKnown RBP6.84□□□□□ -1.31
UBE3A-205ENST00000566215 RABEPKQ7Z6M1 372 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 C2orf15Q8WU43 125 aaKnown RBP6.84□□□□□ -1.31
UBE3A-205ENST00000566215 FGF13Q92913 245 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 FAM193BQ96PV7 902 aaPredicted RBP6.84□□□□□ -1.31
UBE3A-205ENST00000566215 TTPALQ9BTX7 342 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 KIF9Q9HAQ2 790 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 DNAJB4Q9UDY4 337 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 IPPQ9Y573 584 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 WDR27A2RRH5 827 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 CAPN8A6NHC0 703 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 BACH1O14867 736 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 DKK1O94907 266 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 P4HBP07237 508 aaKnown RBP6.84□□□□□ -1.31
UBE3A-205ENST00000566215 RPL9P32969 192 aaKnown RBP6.84□□□□□ -1.31
UBE3A-205ENST00000566215 MBTD1Q05BQ5 628 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 NCBP1Q09161 790 aaKnown RBP6.84□□□□□ -1.31
UBE3A-205ENST00000566215 ALKAL1Q6UXT8 129 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 TMC5Q6UXY8 1006 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 OTUD6AQ7L8S5 288 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 KCNG4Q8TDN1 519 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 KCNV2Q8TDN2 545 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 PSPC1Q8WXF1 523 aaKnown RBP6.84□□□□□ -1.31
UBE3A-205ENST00000566215 ASB16Q96NS5 453 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 CCDC113Q9H0I3 377 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 FZD8Q9H461 694 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 SENP2Q9HC62 589 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 ZNF334Q9HCZ1 680 aaPredicted RBP6.84□□□□□ -1.31
UBE3A-205ENST00000566215 PRMT7Q9NVM4 692 aaPredicted RBP6.84□□□□□ -1.31
UBE3A-205ENST00000566215 CA14Q9ULX7 337 aa6.84□□□□□ -1.31
UBE3A-205ENST00000566215 ZC3H11AO75152 810 aaKnown RBP eCLIP6.83□□□□□ -1.32
UBE3A-205ENST00000566215 IFNAR1P17181 557 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 GBP2P32456 591 aaPredicted RBP6.83□□□□□ -1.32
UBE3A-205ENST00000566215 CLCN3P51790 818 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 UBE2SQ16763 222 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 FBXO43Q4G163 708 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 PPM1LQ5SGD2 360 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 PARM1Q6UWI2 310 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 PIP4P1Q86T03 277 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 C12orf76Q8N812 135 aaPredicted RBP6.83□□□□□ -1.32
UBE3A-205ENST00000566215 NLRP7Q8WX94 980 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 FGF14Q92915 247 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 LRRC3Q9BY71 257 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 UNC45AQ9H3U1 944 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 KCNG1Q9UIX4 513 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 MYO10Q9HD67 2058 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 KCNK5O95279 499 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 KCNE1P15382 129 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 AARSP49588 968 aaKnown RBP eCLIP6.83□□□□□ -1.32
UBE3A-205ENST00000566215 CCINQ13939 588 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 ARHGAP29Q52LW3 1261 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 N4BP2L1Q5TBK1 243 aaPredicted RBP6.83□□□□□ -1.32
UBE3A-205ENST00000566215 SYNE3Q6ZMZ3 975 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 GLRX5Q86SX6 157 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 BCL11AQ9H165 835 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 ANKFY1Q9P2R3 1169 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 MTMR7Q9Y216 660 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 MSRB2Q9Y3D2 182 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 TRDMT1O14717 391 aaKnown RBP6.83□□□□□ -1.32
UBE3A-205ENST00000566215 RHOBTB1O94844 696 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 CYP3A5P20815 502 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 QARSP47897 775 aaKnown RBP6.83□□□□□ -1.32
UBE3A-205ENST00000566215 CXCL12P48061 93 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 GPC5P78333 572 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 MYBPC2Q14324 1141 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 KYAT1Q16773 422 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 RTN1Q16799 776 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 LIN9Q5TKA1 542 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 RNF20Q5VTR2 975 aa6.83□□□□□ -1.32
UBE3A-205ENST00000566215 TWF2Q6IBS0 349 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms