RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 TCIRG1Q13488 830 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 MOGSQ13724 837 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 GCKRQ14397 625 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 KHDC1Q4VXA5 237 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 KLC3Q6P597 504 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 INTS8Q75QN2 995 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 CHST3Q7LGC8 479 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 GIMAP8Q8ND71 665 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.1□□□□□ -1.913e-9■■■□□ 16.8
CHD9-218ENST00000566029 SCG3Q8WXD2 468 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 PTCD3Q96EY7 689 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 TRIM47Q96LD4 638 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SRPK1Q96SB4 655 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 CYTH2Q99418 400 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 UNKQ9C0B0 810 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 RIC8AQ9NPQ8 531 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 NFKBIL1Q9UBC1 381 aaPredicted RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 PEAK1Q9H792 1746 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 USP6P35125 1406 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 AP1G1O43747 822 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SLC4A1P02730 911 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PABPC4LP0CB38 370 aaKnown RBP3.1□□□□□ -1.91
CHD9-218ENST00000566029 LIFRP42702 1097 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 HS6ST3Q8IZP7 471 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ANKS1AQ92625 1134 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SNX27Q96L92 541 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 UBAC1Q9BSL1 405 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 ZBED2Q9BTP6 218 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 SAR1AQ9NR31 198 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PAG1Q9NWQ8 432 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 FAM8A1Q9UBU6 413 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 PITPNM2Q9BZ72 1349 aa3.1□□□□□ -1.91
CHD9-218ENST00000566029 H0Y3Z8 333 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 DGKIO75912 1065 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 FUT4P22083 530 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 XIAPP98170 497 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 GRM2Q14416 872 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 SYCP2LQ5T4T6 812 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 DDI2Q5TDH0 399 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 SYDE2Q5VT97 1194 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 POP5Q969H6 163 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 FNBP1Q96RU3 617 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 METTL5Q9NRN9 209 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 ARHGEF38Q9NXL2 777 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ZNF148Q9UQR1 794 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ZBBXA8MT70 800 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 HAUS5O94927 633 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 PLEKP08567 350 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 STIP1P31948 543 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 RPS6KA1Q15418 735 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CERKLQ49MI3 558 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 PDCD4Q53EL6 469 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 C2CD5Q86YS7 1000 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 C10orf82Q8WW14 230 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 JDP2Q8WYK2 163 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 PPP1R10Q96QC0 940 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 PSMB7Q99436 277 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ECSITQ9BQ95 431 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 FOXP1Q9H334 677 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 PABPC3Q9H361 631 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 SPC25Q9HBM1 224 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CAPN10Q9HC96 672 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 EMILIN3Q9NT22 766 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 SEL1LQ9UBV2 794 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 SNX24Q9Y343 169 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 NDUFB9Q9Y6M9 179 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 SPATA31D1Q6ZQQ2 1576 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 NCKAP5LQ9HCH0 1330 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 KRT5P13647 590 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 RAP1GDS1P52306 607 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 RCAN1P53805 252 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 PEX6Q13608 980 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 BORAQ6PGQ7 559 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 RGS9BPQ6ZS82 235 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 JAMLQ86YT9 394 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 SRBD1Q8N5C6 995 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 SCAIQ8N9R8 606 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 SYMPKQ92797 1274 aaKnown RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 TSG101Q99816 390 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ROPN1BQ9BZX4 212 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 TRIM31Q9BZY9 425 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 TMEM60Q9H2L4 133 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ROPN1Q9HAT0 212 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 TECPR2O15040 1411 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 POTEMA6NI47 508 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ATF3P18847 181 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 GUCY1A2P33402 732 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 TCF7P36402 384 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 HALP42357 657 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 RASSF7Q02833 373 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 ITKQ08881 620 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 SNAPC2Q13487 334 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 TTC38Q5R3I4 469 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 POTEHQ6S545 545 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 POTEGQ6S5H5 508 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 DPP8Q6V1X1 898 aaPredicted RBP3.09□□□□□ -1.91
CHD9-218ENST00000566029 PRR23CQ6ZRP0 262 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 LRRC55Q6ZSA7 311 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 UTS2BQ765I0 119 aa3.09□□□□□ -1.91
CHD9-218ENST00000566029 CYB5R4Q7L1T6 521 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms