RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 MAPTP10636 758 aaKnown RBP21.78■■□□□ 1.08
CMTM3-211ENST00000565922 MCF2P10911 925 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 STAT6P42226 847 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 CACNB1Q02641 598 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-211ENST00000565922 TUSC3Q13454 348 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 FOXD4L5Q5VV16 416 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-211ENST00000565922 MPZL3Q6UWV2 235 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 SV2BQ7L1I2 683 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 MYCT1Q8N699 235 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 KCNG4Q8TDN1 519 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 FOXD4L4Q8WXT5 416 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-211ENST00000565922 TARS2Q9BW92 718 aaKnown RBP21.78■■□□□ 1.08
CMTM3-211ENST00000565922 CDT1Q9H211 546 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 PTPRHQ9HD43 1115 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 CFAP45Q9UL16 551 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 GDAQ9Y2T3 454 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 PRG3Q9Y2Y8 225 aaPredicted RBP21.78■■□□□ 1.08
CMTM3-211ENST00000565922 VCANP13611 3396 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.77■■□□□ 1.08
CMTM3-211ENST00000565922 C2orf71A6NGG8 1288 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 HIDE1A8MVS5 230 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 K7ENM7 598 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 TNFRSF10AO00220 468 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 TRAK2O60296 914 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 TOM1L1O75674 476 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 CXCL14O95715 111 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 GRM5P41594 1212 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 DLX2Q07687 328 aaPredicted RBP21.77■■□□□ 1.08
CMTM3-211ENST00000565922 SMAD4Q13485 552 aaKnown RBP21.77■■□□□ 1.08
CMTM3-211ENST00000565922 HAUS6Q7Z4H7 955 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 FAM178BQ8IXR5 827 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 BCL7CQ8WUZ0 217 aaPredicted RBP21.77■■□□□ 1.08
CMTM3-211ENST00000565922 ZHX3Q9H4I2 956 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 TFIP11Q9UBB9 837 aaKnown RBP21.77■■□□□ 1.08
CMTM3-211ENST00000565922 NCOR1O75376 2440 aa21.77■■□□□ 1.08
CMTM3-211ENST00000565922 CUL9Q8IWT3 2517 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 CUTAO60888 179 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 BRD1O95696 1058 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 GLP2RO95838 553 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 SOD2P04179 222 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 URODP06132 367 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 PROZP22891 400 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 COASYQ13057 564 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 BECN1Q14457 450 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 TMEM184AQ6ZMB5 413 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 CASP10Q92851 521 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 BICD1Q96G01 975 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 MSLNLQ96KJ4 702 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 MARCH5Q9NX47 278 aa21.76■■□□□ 1.07
CMTM3-211ENST00000565922 CLDN3O15551 220 aa21.75■■□□□ 1.07
CMTM3-211ENST00000565922 IL9P15248 144 aa21.75■■□□□ 1.07
CMTM3-211ENST00000565922 NOLC1Q14978 699 aaKnown RBP eCLIP21.75■■□□□ 1.07
CMTM3-211ENST00000565922 PPFIBP1Q86W92 1011 aa21.75■■□□□ 1.07
CMTM3-211ENST00000565922 HERC2P3Q9BVR0 1158 aa21.75■■□□□ 1.07
CMTM3-211ENST00000565922 EMILIN2Q9BXX0 1053 aa21.75■■□□□ 1.07
CMTM3-211ENST00000565922 MRPL17Q9NRX2 175 aaKnown RBP21.75■■□□□ 1.07
CMTM3-211ENST00000565922 CLEC1BQ9P126 229 aa21.75■■□□□ 1.07
CMTM3-211ENST00000565922 ANKFY1Q9P2R3 1169 aa21.75■■□□□ 1.07
CMTM3-211ENST00000565922 SEL1LQ9UBV2 794 aa21.75■■□□□ 1.07
CMTM3-211ENST00000565922 PRKAG3Q9UGI9 489 aa21.75■■□□□ 1.07
CMTM3-211ENST00000565922 PTGESO14684 152 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 MBTPS2O43462 519 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 HOXB8P17481 243 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-211ENST00000565922 MATR3P43243 847 aaKnown RBP eCLIP21.74■■□□□ 1.07
CMTM3-211ENST00000565922 KCNC3Q14003 757 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 HSP90AA2PQ14568 343 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-211ENST00000565922 PTPN14Q15678 1187 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 ZBTB33Q86T24 672 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 SMRP1Q8NCR6 262 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 ACAP3Q96P50 834 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 VN1R3Q9BXE9 311 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 LRRC27Q9C0I9 530 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 CUEDC2Q9H467 287 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 ADAM28Q9UKQ2 775 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 BARX2Q9UMQ3 279 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-211ENST00000565922 HCFC2Q9Y5Z7 792 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 TCHHQ07283 1943 aa21.74■■□□□ 1.07
CMTM3-211ENST00000565922 HNRNPDLO14979 420 aaKnown RBP21.73■■□□□ 1.07
CMTM3-211ENST00000565922 GAP43P17677 238 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 LIG4P49917 911 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 SMAD2Q15796 467 aaKnown RBP21.73■■□□□ 1.07
CMTM3-211ENST00000565922 CLUL1Q15846 466 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 KYAT1Q16773 422 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 FOXD4L6Q3SYB3 417 aaPredicted RBP21.73■■□□□ 1.07
CMTM3-211ENST00000565922 KIAA1841Q6NSI8 718 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 FUT10Q6P4F1 479 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 FOXD4L3Q6VB84 417 aaPredicted RBP21.73■■□□□ 1.07
CMTM3-211ENST00000565922 DYMQ7RTS9 669 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 GPR65Q8IYL9 337 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 CEP120Q8N960 986 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 DDX12PQ92771 950 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 UROC1Q96N76 676 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 POP1Q99575 1024 aaKnown RBP21.73■■□□□ 1.07
CMTM3-211ENST00000565922 ST6GALNAC4Q9H4F1 302 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 SLC38A7Q9NVC3 462 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 TBX20Q9UMR3 447 aa21.73■■□□□ 1.07
CMTM3-211ENST00000565922 SF3B1O75533 1304 aaKnown RBP eCLIP21.73■■□□□ 1.07
CMTM3-211ENST00000565922 TTC28Q96AY4 2481 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 CASTOR2A6NHX0 329 aa21.72■■□□□ 1.07
CMTM3-211ENST00000565922 ABLIM1O14639 778 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms