RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ANK1P16157 1881 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 RPS6KA5O75582 802 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 GYPCP04921 128 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 PPP3CAQ08209 521 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 KCNMA1Q12791 1236 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 KYAT1Q16773 422 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 EXOC3L4Q17RC7 722 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 CBWD6Q4V339 395 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 CBWD3Q5JTY5 395 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 CBWD5Q5RIA9 395 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 SLC27A1Q6PCB7 646 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 FAM228AQ86W67 206 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 CCDC150Q8NCX0 1101 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 IQCDQ96DY2 449 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 CITO14578 2027 aa20.35■□□□□ 0.85
COMMD4-213ENST00000565834 GCLMP48507 274 aa20.34■□□□□ 0.85
COMMD4-213ENST00000565834 MXI1P50539 228 aa20.34■□□□□ 0.85
COMMD4-213ENST00000565834 OSTNP61366 133 aa20.34■□□□□ 0.85
COMMD4-213ENST00000565834 RBL2Q08999 1139 aa20.34■□□□□ 0.85
COMMD4-213ENST00000565834 FAM26DQ5JW98 314 aa20.34■□□□□ 0.85
COMMD4-213ENST00000565834 CEP120Q8N960 986 aa20.34■□□□□ 0.85
COMMD4-213ENST00000565834 CPLX3Q8WVH0 158 aa20.34■□□□□ 0.85
COMMD4-213ENST00000565834 POP1Q99575 1024 aaKnown RBP20.34■□□□□ 0.85
COMMD4-213ENST00000565834 LSM14BQ9BX40 385 aaKnown RBP20.34■□□□□ 0.85
COMMD4-213ENST00000565834 PDE11AQ9HCR9 933 aa20.34■□□□□ 0.85
COMMD4-213ENST00000565834 FAM207AQ9NSI2 230 aaPredicted RBP20.34■□□□□ 0.85
COMMD4-213ENST00000565834 GCNT4Q9P109 453 aa20.34■□□□□ 0.85
COMMD4-213ENST00000565834 P4HA2O15460 535 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 NPTXRO95502 500 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 CLTAP09496 248 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 CASP14P31944 242 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 GTF2H1P32780 548 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 GJA8P48165 433 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 MNX1P50219 401 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-213ENST00000565834 CETN1Q12798 172 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 HS1BP3Q53T59 392 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 FIGNQ5HY92 759 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 ZNF618Q5T7W0 954 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 FAM126BQ8IXS8 530 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 NEK11Q8NG66 645 aa20.33■□□□□ 0.85
COMMD4-213ENST00000565834 RPF1Q9H9Y2 349 aaKnown RBP20.33■□□□□ 0.85
COMMD4-213ENST00000565834 TOPORSQ9NS56 1045 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-213ENST00000565834 KIAA0100Q14667 2235 aaKnown RBP20.33■□□□□ 0.85
COMMD4-213ENST00000565834 MROH7Q68CQ1 1323 aa20.33■□□□□ 0.84
COMMD4-213ENST00000565834 AKR1B15C9JRZ8 316 aaPredicted RBP20.32■□□□□ 0.84
COMMD4-213ENST00000565834 STAG3L1P0CL83 205 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 CKBP12277 381 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 TNNI1P19237 187 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 WNT7BP56706 349 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 CLDN10P78369 228 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 ARID5BQ14865 1188 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 SURF1Q15526 300 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 ENOX2Q16206 610 aaKnown RBP20.32■□□□□ 0.84
COMMD4-213ENST00000565834 FBXO47Q5MNV8 452 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 CCDC51Q96ER9 411 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 CGRRF1Q99675 332 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 TMEM117Q9H0C3 514 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 TMEM8AQ9HCN3 771 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 ST3GAL5Q9UNP4 418 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 GPR182O15218 404 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 PMM2O15305 246 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 PON1P27169 355 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 FXR1P51114 621 aaKnown RBP eCLIP20.32■□□□□ 0.84
COMMD4-213ENST00000565834 POU5F1Q01860 360 aaKnown RBP20.32■□□□□ 0.84
COMMD4-213ENST00000565834 GOLGA8FQ08AF8 430 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 GOLGA8DPQ0D2H9 430 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 KRT39Q6A163 491 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 CNGA4Q8IV77 575 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 ANKLE1Q8NAG6 615 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 CAGE1Q8TC20 777 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 FAM212AQ96EL1 285 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 TRIM6Q9C030 488 aaPredicted RBP20.32■□□□□ 0.84
COMMD4-213ENST00000565834 TTYH3Q9C0H2 523 aa20.32■□□□□ 0.84
COMMD4-213ENST00000565834 TTC26A0AVF1 554 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 TLR3O15455 904 aaKnown RBP20.31■□□□□ 0.84
COMMD4-213ENST00000565834 MFAP3LO75121 409 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 IL18RAPO95256 599 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 CXCL8P10145 99 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 GHRP10912 638 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 SLC9A1P19634 815 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 GRM5P41594 1212 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 ADKP55263 362 aaKnown RBP20.31■□□□□ 0.84
COMMD4-213ENST00000565834 NFX1Q12986 1120 aaKnown RBP20.31■□□□□ 0.84
COMMD4-213ENST00000565834 TMEM192Q8IY95 271 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 TC2NQ8N9U0 490 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 CACTINQ8WUQ7 758 aaKnown RBP20.31■□□□□ 0.84
COMMD4-213ENST00000565834 CCDC94Q9BW85 323 aaPredicted RBP20.31■□□□□ 0.84
COMMD4-213ENST00000565834 EIF2AQ9BY44 585 aaKnown RBP20.31■□□□□ 0.84
COMMD4-213ENST00000565834 PLCB1Q9NQ66 1216 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 CAPN11Q9UMQ6 739 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 LUC7L2Q9Y383 392 aaKnown RBP20.31■□□□□ 0.84
COMMD4-213ENST00000565834 RALGAPA2Q2PPJ7 1873 aa20.31■□□□□ 0.84
COMMD4-213ENST00000565834 A0A1W2PQJ5 194 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 EPHB6O15197 1021 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 PQBP1O60828 265 aaKnown RBP20.3■□□□□ 0.84
COMMD4-213ENST00000565834 CD4P01730 458 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 ATN1P54259 1190 aaPredicted RBP20.3■□□□□ 0.84
COMMD4-213ENST00000565834 PAK2Q13177 524 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 BFSP2Q13515 415 aa20.3■□□□□ 0.84
COMMD4-213ENST00000565834 LMBRD2Q68DH5 695 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms