RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 EEF1DP3Q658K8 133 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 LARP1BQ659C4 914 aaKnown RBP7.06□□□□□ -1.28
TCF4-228ENST00000565393 CDCA2Q69YH5 1023 aaPredicted RBP7.06□□□□□ -1.28
TCF4-228ENST00000565393 DCLRE1AQ6PJP8 1040 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 PRSS55Q6UWB4 352 aaPredicted RBP7.06□□□□□ -1.28
TCF4-228ENST00000565393 CCDC149Q6ZUS6 474 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 IGSF22Q8N9C0 903 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 FEZF2Q8TBJ5 459 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 SMG7Q92540 1137 aaKnown RBP7.06□□□□□ -1.28
TCF4-228ENST00000565393 CDK5RAP3Q96JB5 506 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 TMX3Q96JJ7 454 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 PRRX2Q99811 253 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 PAAF1Q9BRP4 392 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 TTPALQ9BTX7 342 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 CCDC94Q9BW85 323 aaPredicted RBP7.06□□□□□ -1.28
TCF4-228ENST00000565393 MFSD1Q9H3U5 465 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 PLEKHA4Q9H4M7 779 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 KMT5AQ9NQR1 393 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.06□□□□□ -1.28
TCF4-228ENST00000565393 CACNG4Q9UBN1 327 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 SMC3Q9UQE7 1217 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 USTQ9Y2C2 406 aa7.06□□□□□ -1.28
TCF4-228ENST00000565393 RBM19Q9Y4C8 960 aaKnown RBP7.06□□□□□ -1.28
TCF4-228ENST00000565393 SF3B1O75533 1304 aaKnown RBP eCLIP7.05□□□□□ -1.28
TCF4-228ENST00000565393 VWA3AA6NCI4 1184 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 SLC16A4O15374 487 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 TGM5O43548 720 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 TRAPPC3O43617 180 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 RFPL2O75678 378 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 RECQL4O94761 1208 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 B3GAT3O94766 335 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 PDGFBP01127 241 aaPredicted RBP7.05□□□□□ -1.28
TCF4-228ENST00000565393 HOXD11P31277 338 aaPredicted RBP7.05□□□□□ -1.28
TCF4-228ENST00000565393 PRPHP41219 470 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 MATR3P43243 847 aaKnown RBP eCLIP7.05□□□□□ -1.28
TCF4-228ENST00000565393 NPTX2P47972 431 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 MCM2P49736 904 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 SMTNP53814 917 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 NHLH1Q02575 133 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 CREMQ03060 361 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 STRN3Q13033 797 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 DMP1Q13316 513 aaPredicted RBP7.05□□□□□ -1.28
TCF4-228ENST00000565393 DHX8Q14562 1220 aaKnown RBP7.05□□□□□ -1.28
TCF4-228ENST00000565393 RINT1Q6NUQ1 792 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 CYP26C1Q6V0L0 522 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 C15orf39Q6ZRI6 1047 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 FLCNQ8NFG4 579 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 HDAC7Q8WUI4 952 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 STAMQ92783 540 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 ASIC4Q96FT7 647 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 DRC1Q96MC2 740 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 ACAP3Q96P50 834 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 TARS2Q9BW92 718 aaKnown RBP7.05□□□□□ -1.28
TCF4-228ENST00000565393 MRPL4Q9BYD3 311 aaKnown RBP7.05□□□□□ -1.28
TCF4-228ENST00000565393 CCDC113Q9H0I3 377 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 NT5C3AQ9H0P0 336 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 CXCL16Q9H2A7 254 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 SMOC2Q9H3U7 446 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 KCNK12Q9HB15 430 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.05□□□□□ -1.28
TCF4-228ENST00000565393 FNIP2Q9P278 1114 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 KCNG1Q9UIX4 513 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 FBXL21Q9UKT6 434 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 POLIQ9UNA4 740 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 TNFSF13BQ9Y275 285 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.05□□□□□ -1.28
TCF4-228ENST00000565393 CDH23Q9H251 3354 aa7.05□□□□□ -1.28
TCF4-228ENST00000565393 RALGAPA2Q2PPJ7 1873 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 MYO9BQ13459 2157 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 SMIM28A0A1B0GU29 152 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 TULP1O00294 542 aaPredicted RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 PTGESO14684 152 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 KIF4AO95239 1232 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 EFEMP2O95967 443 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 HARSP12081 509 aaKnown RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 OR1D2P34982 312 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 UBA7P41226 1012 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 MRE11P49959 708 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 CLCNKBP51801 687 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 PTPN5P54829 565 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 ELAVL2Q12926 359 aaKnown RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 TDGQ13569 410 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 DCAF4L1Q3SXM0 396 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 ZNF568Q3ZCX4 644 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 GLRA4Q5JXX5 417 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 RTP2Q5QGT7 225 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 PPM1LQ5SGD2 360 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 PDXDC1Q6P996 788 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 LILRA6Q6PI73 481 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 C1orf186Q6ZWK4 172 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 GPR65Q8IYL9 337 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 RNF168Q8IYW5 571 aaPredicted RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 SYT2Q8N9I0 419 aaPredicted RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 ST13P5Q8NFI4 369 aaPredicted RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 CMASQ8NFW8 434 aaPredicted RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 RASSF8Q8NHQ8 419 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 LNX1Q8TBB1 728 aaPredicted RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 RSAD2Q8WXG1 361 aa7.04□□□□□ -1.28
TCF4-228ENST00000565393 ATOH1Q92858 354 aaPredicted RBP7.04□□□□□ -1.28
TCF4-228ENST00000565393 DDX27Q96GQ7 796 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms