RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 WFS1O76024 890 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 SPATA31D3P0C874 917 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 DPEP1P16444 411 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 VCAM1P19320 739 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 ZYXQ15942 572 aaKnown RBP17.41■□□□□ 0.38
LINC00554-201ENST00000564841 STRIP1Q5VSL9 837 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 SPATA31D4Q6ZUB0 917 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 CCDC105Q8IYK2 499 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 LRMDAQ9H2I8 198 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 AAASQ9NRG9 546 aa17.41■□□□□ 0.38
LINC00554-201ENST00000564841 PPP1R11O60927 126 aaPredicted RBP17.4■□□□□ 0.38
LINC00554-201ENST00000564841 CHRNB2P17787 502 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 VPS41P49754 854 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 CACNA2D1P54289 1103 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 GABPAQ06546 454 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 RRP1BQ14684 758 aaKnown RBP17.4■□□□□ 0.38
LINC00554-201ENST00000564841 SGSM1Q2NKQ1 1148 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 TSNAXIP1Q2TAA8 658 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 C10orf76Q5T2E6 689 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 HHIPL2Q6UWX4 724 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 SH3BP5LQ7L8J4 393 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 SYCP3Q8IZU3 236 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 ZFAND2BQ8WV99 257 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 NT5C3AQ9H0P0 336 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 KCTD10Q9H3F6 313 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 EMILIN3Q9NT22 766 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 MAST2Q6P0Q8 1798 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 POTEB3A0JP26 581 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 POTECB2RU33 542 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 KRT36O76013 467 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 RARGP13631 454 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 KCNA3P22001 575 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 MTFR1Q15390 333 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 LRRC23Q53EV4 343 aaPredicted RBP17.4■□□□□ 0.38
LINC00554-201ENST00000564841 SPDYCQ5MJ68 293 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 KRT79Q5XKE5 535 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 POTEBQ6S5H4 581 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 OLIG1Q8TAK6 271 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 SCG3Q8WXD2 468 aaKnown RBP17.4■□□□□ 0.38
LINC00554-201ENST00000564841 MTMR9Q96QG7 549 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 NENFQ9UMX5 172 aa17.4■□□□□ 0.38
LINC00554-201ENST00000564841 EEF2P13639 858 aaKnown RBP17.39■□□□□ 0.38
LINC00554-201ENST00000564841 ACADSP16219 412 aa17.39■□□□□ 0.38
LINC00554-201ENST00000564841 ADCY7P51828 1080 aa17.39■□□□□ 0.38
LINC00554-201ENST00000564841 PPATQ06203 517 aa17.39■□□□□ 0.38
LINC00554-201ENST00000564841 CCDC6Q16204 474 aa17.39■□□□□ 0.38
LINC00554-201ENST00000564841 SNX30Q5VWJ9 437 aa17.39■□□□□ 0.38
LINC00554-201ENST00000564841 STYK1Q6J9G0 422 aa17.39■□□□□ 0.38
LINC00554-201ENST00000564841 RBBP8NLQ8NC74 664 aaPredicted RBP17.39■□□□□ 0.38
LINC00554-201ENST00000564841 LRRC37BQ96QE4 947 aa17.39■□□□□ 0.38
LINC00554-201ENST00000564841 MOV10L1Q9BXT6 1211 aaKnown RBP17.39■□□□□ 0.38
LINC00554-201ENST00000564841 SIX2Q9NPC8 291 aa17.39■□□□□ 0.38
LINC00554-201ENST00000564841 TXLNGQ9NUQ3 528 aa17.39■□□□□ 0.38
LINC00554-201ENST00000564841 FAM187AA6NFU0 413 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 CLIC2O15247 247 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 KRT18P05783 430 aaKnown RBP17.39■□□□□ 0.37
LINC00554-201ENST00000564841 WDR4P57081 412 aaKnown RBP17.39■□□□□ 0.37
LINC00554-201ENST00000564841 RCN1Q15293 331 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 RNF43Q68DV7 783 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 ADGRF4Q8IZF3 695 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 LRRC8CQ8TDW0 803 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 MAIP1Q8WWC4 291 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 STK17AQ9UEE5 414 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 COL11A2P13942 1736 aaPredicted RBP17.39■□□□□ 0.37
LINC00554-201ENST00000564841 SFI1A8K8P3 1242 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 GSTT1P30711 240 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 BTNL9Q6UXG8 535 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 CDAN1Q8IWY9 1227 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 TTLL6Q8N841 843 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 DAGLBQ8NCG7 672 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 CSRNP1Q96S65 589 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 SCOCQ9UIL1 159 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 RASAL2Q9UJF2 1139 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 ALG6Q9Y672 507 aa17.39■□□□□ 0.37
LINC00554-201ENST00000564841 SCN9AQ15858 1988 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 DDX60LQ5H9U9 1706 aaKnown RBP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 SIGLEC16A6NMB1 481 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 PHF2O75151 1096 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 AKAP3O75969 853 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 CYP1A1P04798 512 aaPredicted RBP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 KCNA1Q09470 495 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 MFSD5Q6N075 450 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 ARHGAP27Q6ZUM4 889 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 KLHL23Q8NBE8 558 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 MRRFQ96E11 262 aaKnown RBP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 BTBD6Q96KE9 485 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 ZDHHC15Q96MV8 337 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 MIPEPQ99797 713 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 STMN4Q9H169 189 aaPredicted RBP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 GCNT4Q9P109 453 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 hCG_2014768A0A024R1R8 64 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 CETN3O15182 167 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 TP73O15350 636 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 DHX34Q14147 1143 aaKnown RBP17.38■□□□□ 0.37
LINC00554-201ENST00000564841 TMEM266Q2M3C6 531 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 PARP6Q2NL67 630 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 USH1GQ495M9 461 aa17.38■□□□□ 0.37
LINC00554-201ENST00000564841 HHATQ5VTY9 493 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms