RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 USP34Q70CQ2 3546 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 ARHGEF35A5YM69 484 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 PAPLNO95428 1278 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 PTGDRQ13258 359 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 ELMSAN1Q6PJG2 1045 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 C4orf32Q8N8J7 132 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 RABGGTAQ92696 567 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 RAB34Q9BZG1 259 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 PDZD7Q9H5P4 517 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 WDR6Q9NNW5 1121 aaKnown RBP20.41■□□□□ 0.86
CLN6-204ENST00000564752 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.41■□□□□ 0.86
CLN6-204ENST00000564752 FNIP2Q9P278 1114 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 LRWD1Q9UFC0 647 aa20.41■□□□□ 0.86
CLN6-204ENST00000564752 LAD1O00515 517 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 ACKR2O00590 384 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 N4BP3O15049 544 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 TADA2AO75478 443 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 SPATA31D3P0C874 917 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 CCT6AP40227 531 aaKnown RBP20.4■□□□□ 0.86
CLN6-204ENST00000564752 NAMPTP43490 491 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 PRPF4BQ13523 1007 aaKnown RBP20.4■□□□□ 0.86
CLN6-204ENST00000564752 HSP90AA2PQ14568 343 aaPredicted RBP20.4■□□□□ 0.86
CLN6-204ENST00000564752 MAPK6Q16659 721 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 RILPL1Q5EBL4 403 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 SPATA31D4Q6ZUB0 917 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 PALB2Q86YC2 1186 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 PAAF1Q9BRP4 392 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 CCDC113Q9H0I3 377 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 IRF2BPLQ9H1B7 796 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 PLEKHA4Q9H4M7 779 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 KCNK12Q9HB15 430 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 SNTG2Q9NY99 539 aa20.4■□□□□ 0.86
CLN6-204ENST00000564752 TGM5O43548 720 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 N4BP1O75113 896 aaKnown RBP20.39■□□□□ 0.85
CLN6-204ENST00000564752 RFPL2O75678 378 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 PRKCBP05771 671 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 MYBP10242 640 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 TUSC3Q13454 348 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 TDGQ13569 410 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 ECM1Q16610 540 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 LILRA6Q6PI73 481 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 DEPTORQ8TB45 409 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 RIN2Q8WYP3 895 aaPredicted RBP20.39■□□□□ 0.85
CLN6-204ENST00000564752 ZNF707Q96C28 371 aaPredicted RBP20.39■□□□□ 0.85
CLN6-204ENST00000564752 BACH2Q9BYV9 841 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.39■□□□□ 0.85
CLN6-204ENST00000564752 CACNG4Q9UBN1 327 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 USP20Q9Y2K6 914 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 STK24Q9Y6E0 443 aa20.39■□□□□ 0.85
CLN6-204ENST00000564752 PTGESO14684 152 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 GALR2O43603 387 aaPredicted RBP20.38■□□□□ 0.85
CLN6-204ENST00000564752 CREMQ03060 361 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 PDIA5Q14554 519 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 PPP2R5AQ15172 486 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 ASTLQ6HA08 431 aaPredicted RBP20.38■□□□□ 0.85
CLN6-204ENST00000564752 TMEM105Q8N8V8 129 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 SNX29Q8TEQ0 813 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 NT5C3AQ9H0P0 336 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 POLD4Q9HCU8 107 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 FAM86C1Q9NVL1 165 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 IGSF9Q9P2J2 1179 aa20.38■□□□□ 0.85
CLN6-204ENST00000564752 SF3B1O75533 1304 aaKnown RBP eCLIP20.37■□□□□ 0.858e-9■■■■■ 155.1
CLN6-204ENST00000564752 CASTOR2A6NHX0 329 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 EDN1P05305 212 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 THP07101 528 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 RPL17P18621 184 aaKnown RBP20.37■□□□□ 0.85
CLN6-204ENST00000564752 PRPHP41219 470 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 NAB2Q15742 525 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 TMEM132AQ24JP5 1023 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 RTP2Q5QGT7 225 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 LARP1BQ659C4 914 aaKnown RBP20.37■□□□□ 0.85
CLN6-204ENST00000564752 IGSF22Q8N9C0 903 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 SMG7Q92540 1137 aaKnown RBP20.37■□□□□ 0.85
CLN6-204ENST00000564752 STAMQ92783 540 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 ATOH1Q92858 354 aaPredicted RBP20.37■□□□□ 0.85
CLN6-204ENST00000564752 ADPGKQ9BRR6 497 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 CXCL16Q9H2A7 254 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 BHMT2Q9H2M3 363 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 ZDHHC7Q9NXF8 308 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 DAXXQ9UER7 740 aaPredicted RBP20.37■□□□□ 0.85
CLN6-204ENST00000564752 KIAA1024Q9UPX6 916 aa20.37■□□□□ 0.85
CLN6-204ENST00000564752 CLUHO75153 1309 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 MYO15AQ9UKN7 3530 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 H0Y858 1186 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 RECQL4O94761 1208 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 LIG1P18858 919 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 CLCN5P51795 746 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 EFNA5P52803 228 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 EEF1DP3Q658K8 133 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 PRSS55Q6UWB4 352 aaPredicted RBP20.36■□□□□ 0.85
CLN6-204ENST00000564752 DTHD1Q6ZMT9 781 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 GLYCTKQ8IVS8 523 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 KIFAP3Q92845 792 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 IFT74Q96LB3 600 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 PRKD2Q9BZL6 878 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 MFSD1Q9H3U5 465 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 EPS15L1Q9UBC2 864 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 DUSP12Q9UNI6 340 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 DMDP11532 3685 aa20.36■□□□□ 0.85
CLN6-204ENST00000564752 KIF4AO95239 1232 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms