RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CCDC149Q6ZUS6 474 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 STAMQ92783 540 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 CCDC113Q9H0I3 377 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 BHMT2Q9H2M3 363 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 PDZD7Q9H5P4 517 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 C17orf75Q9HAS0 396 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 LIMD1Q9UGP4 676 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 KIAA1024Q9UPX6 916 aa13.44□□□□□ -0.26
GTF3C1-204ENST00000564664 SF3B1O75533 1304 aaKnown RBP eCLIP13.43□□□□□ -0.264e-6■■■■■ 69.4
GTF3C1-204ENST00000564664 CCDC195A0A1B0GUA6 201 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 K7ERI5 159 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 C2CD2LO14523 706 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 WEE2P0C1S8 567 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 AVPR2P30518 371 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 MCM2P49736 904 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 TOB1P50616 345 aaPredicted RBP13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 HSP90AA2PQ14568 343 aaPredicted RBP13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 RILPL1Q5EBL4 403 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 DTHD1Q6ZMT9 781 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 NXPE3Q969Y0 559 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 TIPINQ9BVW5 301 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 GPR62Q9BZJ7 368 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 TMEM134Q9H6X4 195 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 MAN1C1Q9NR34 630 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 ZDHHC7Q9NXF8 308 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 KLK14Q9P0G3 267 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 IGSF9Q9P2J2 1179 aa13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 TDRD15B5MCY1 1934 aaKnown RBP13.43□□□□□ -0.26
GTF3C1-204ENST00000564664 SP100P23497 879 aaPredicted RBP13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 ECM1Q16610 540 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 KANK3Q6NY19 840 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 LILRA6Q6PI73 481 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 RTL10Q7L3V2 364 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 CDR2LQ86X02 465 aaPredicted RBP13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 SNX29Q8TEQ0 813 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 DRC1Q96MC2 740 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 TTPALQ9BTX7 342 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 UPF2Q9HAU5 1272 aaKnown RBP13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 WDR6Q9NNW5 1121 aaKnown RBP13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 DDX19AQ9NUU7 478 aaKnown RBP13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 SNTG2Q9NY99 539 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 CDH22Q9UJ99 828 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 TNFSF13BQ9Y275 285 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 PCDHB6Q9Y5E3 794 aa13.42□□□□□ -0.26
GTF3C1-204ENST00000564664 RECQL4O94761 1208 aa13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 BRD1O95696 1058 aa13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 TDGQ13569 410 aa13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 ATF7IP2Q5U623 682 aa13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 DCLRE1AQ6PJP8 1040 aa13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 ALYREFQ86V81 257 aaKnown RBP13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 RIN2Q8WYP3 895 aaPredicted RBP13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 UROC1Q96N76 676 aa13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 NTPCRQ9BSD7 190 aaKnown RBP13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 NT5C3AQ9H0P0 336 aa13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.41□□□□□ -0.26
GTF3C1-204ENST00000564664 TTLL13PA6NNM8 815 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 TMEM189-UBE2V1I3L0A0 370 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 PTGESO14684 152 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 SLC26A4O43511 780 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 TGM5O43548 720 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 TRAPPC3O43617 180 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 CLCN5P51795 746 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 DMP1Q13316 513 aaPredicted RBP13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 NAB2Q15742 525 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 IER5LQ5T953 404 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 NT5DC1Q5TFE4 455 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 ARL6IP4Q66PJ3 421 aaKnown RBP13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 PALB2Q86YC2 1186 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 PIK3R5Q8WYR1 880 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 DDX27Q96GQ7 796 aaKnown RBP13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 PRKD2Q9BZL6 878 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 TOPORSQ9NS56 1045 aaPredicted RBP13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 KCND2Q9NZV8 630 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 EPS15L1Q9UBC2 864 aa13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 ZFP37Q9Y6Q3 630 aaPredicted RBP13.4□□□□□ -0.26
GTF3C1-204ENST00000564664 MTCL1Q9Y4B5 1905 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 CCDC169A6NNP5 214 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 F8W810 466 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 HNRNPA1P09651 372 aaKnown RBP eCLIP13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 LIG1P18858 919 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 SCP2P22307 547 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 GUCY2CP25092 1073 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 NPTX2P47972 431 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 MRE11P49959 708 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 YARSP54577 528 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 PEX3P56589 373 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 NBR1Q14596 966 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 HYIQ5T013 277 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 FAM171A1Q5VUB5 890 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 EEF1DP3Q658K8 133 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 MCTP1Q6DN14 999 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 RINT1Q6NUQ1 792 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 ALKAL1Q6UXT8 129 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 C1orf186Q6ZWK4 172 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 PRSS33Q8NF86 280 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms