RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 FEZF2Q8TBJ5 459 aa20.88■□□□□ 0.93
NME3-207ENST00000564628 NFKBIZQ9BYH8 718 aa20.88■□□□□ 0.93
NME3-207ENST00000564628 RHOBTB2Q9BYZ6 727 aa20.88■□□□□ 0.93
NME3-207ENST00000564628 MINDY3Q9H8M7 445 aa20.88■□□□□ 0.93
NME3-207ENST00000564628 GPRC5CQ9NQ84 441 aa20.88■□□□□ 0.93
NME3-207ENST00000564628 DUSP12Q9UNI6 340 aa20.88■□□□□ 0.93
NME3-207ENST00000564628 DNM3Q9UQ16 869 aa20.88■□□□□ 0.93
NME3-207ENST00000564628 SSX2IPQ9Y2D8 614 aa20.88■□□□□ 0.93
NME3-207ENST00000564628 SRPRBQ9Y5M8 271 aaKnown RBP20.88■□□□□ 0.93
NME3-207ENST00000564628 NRP1O14786 923 aa20.87■□□□□ 0.93
NME3-207ENST00000564628 SOD2P04179 222 aa20.87■□□□□ 0.93
NME3-207ENST00000564628 NCLP19338 710 aaKnown RBP20.87■□□□□ 0.93
NME3-207ENST00000564628 AOC1P19801 751 aa20.87■□□□□ 0.93
NME3-207ENST00000564628 MARCKSP29966 332 aaPredicted RBP20.87■□□□□ 0.93
NME3-207ENST00000564628 AFF1P51825 1210 aaKnown RBP20.87■□□□□ 0.93
NME3-207ENST00000564628 CYP26C1Q6V0L0 522 aa20.87■□□□□ 0.93
NME3-207ENST00000564628 KCNK12Q9HB15 430 aa20.87■□□□□ 0.93
NME3-207ENST00000564628 IGSF9Q9P2J2 1179 aa20.87■□□□□ 0.93
NME3-207ENST00000564628 DPP7Q9UHL4 492 aa20.87■□□□□ 0.93
NME3-207ENST00000564628 INPPL1O15357 1258 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 SSBP05455 408 aaKnown RBP eCLIP20.86■□□□□ 0.93
NME3-207ENST00000564628 URODP06132 367 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 UBA7P41226 1012 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 FOXK2Q01167 660 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 CEBPZQ03701 1054 aaKnown RBP20.86■□□□□ 0.93
NME3-207ENST00000564628 TFDP1Q14186 410 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 ELMSAN1Q6PJG2 1045 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 FLCNQ8NFG4 579 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 ZNF396Q96N95 335 aaPredicted RBP20.86■□□□□ 0.93
NME3-207ENST00000564628 RPS6KC1Q96S38 1066 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 HERC2P3Q9BVR0 1158 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 CCSER1Q9C0I3 900 aa20.86■□□□□ 0.93
NME3-207ENST00000564628 EFEMP2O95967 443 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 POMCP01189 267 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 ADH1AP07327 375 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 NPR3P17342 541 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 CDCA2Q69YH5 1023 aaPredicted RBP20.85■□□□□ 0.93
NME3-207ENST00000564628 RNF168Q8IYW5 571 aaPredicted RBP20.85■□□□□ 0.93
NME3-207ENST00000564628 LINC00301Q8NCQ3 95 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 SMG8Q8ND04 991 aaKnown RBP20.85■□□□□ 0.93
NME3-207ENST00000564628 LRRC15Q8TF66 581 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 BSNDQ8WZ55 320 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 CCDC51Q96ER9 411 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 RTP3Q9BQQ7 232 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 RUSC1Q9BVN2 902 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 CSRNP2Q9H175 543 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 MAN1C1Q9NR34 630 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 MARCH5Q9NX47 278 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 ZDHHC9Q9Y397 364 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 C2orf16Q68DN1 1984 aa20.85■□□□□ 0.93
NME3-207ENST00000564628 YEATS4O95619 227 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 C1RP00736 705 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 ITGA4P13612 1032 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 AXLP30530 894 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 SLC12A3P55017 1021 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 MBTD1Q05BQ5 628 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 ZRSR1Q15695 479 aaKnown RBP20.84■□□□□ 0.93
NME3-207ENST00000564628 FOXD4L5Q5VV16 416 aaPredicted RBP20.84■□□□□ 0.93
NME3-207ENST00000564628 RINT1Q6NUQ1 792 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 C1orf186Q6ZWK4 172 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 USP49Q70CQ1 688 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 MAEAQ7L5Y9 396 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 CCDC105Q8IYK2 499 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 COLGALT2Q8IYK4 626 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 SYT2Q8N9I0 419 aaPredicted RBP20.84■□□□□ 0.93
NME3-207ENST00000564628 FOXD4L4Q8WXT5 416 aaPredicted RBP20.84■□□□□ 0.93
NME3-207ENST00000564628 STAMQ92783 540 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 NKD2Q969F2 451 aaPredicted RBP20.84■□□□□ 0.93
NME3-207ENST00000564628 CDK5RAP3Q96JB5 506 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 RXFP1Q9HBX9 757 aa20.84■□□□□ 0.93
NME3-207ENST00000564628 WDR6Q9NNW5 1121 aaKnown RBP20.84■□□□□ 0.93
NME3-207ENST00000564628 TCHHQ07283 1943 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 C2CD2LO14523 706 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 TEX28O15482 410 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 ERLIN2O94905 339 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 PAPLNO95428 1278 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 GLUD2P49448 558 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 DSC1Q08554 894 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 MAPK7Q13164 816 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 AMHR2Q16671 573 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 KIAA0319Q5VV43 1072 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 FRMD5Q7Z6J6 570 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 DAW1Q8N136 415 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 KRI1Q8N9T8 703 aaKnown RBP20.83■□□□□ 0.93
NME3-207ENST00000564628 HDAC7Q8WUI4 952 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 KIFAP3Q92845 792 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 CALML4Q96GE6 196 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 EPSTI1Q96J88 318 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 CLIC6Q96NY7 704 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 PLIN2Q99541 437 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 BLOC1S4Q9NUP1 217 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 FBXL21Q9UKT6 434 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 PRG3Q9Y2Y8 225 aaPredicted RBP20.83■□□□□ 0.93
NME3-207ENST00000564628 IPPQ9Y573 584 aa20.83■□□□□ 0.93
NME3-207ENST00000564628 PTPRZ1P23471 2315 aaPredicted RBP20.82■□□□□ 0.92
NME3-207ENST00000564628 CCDC195A0A1B0GUA6 201 aa20.82■□□□□ 0.92
NME3-207ENST00000564628 ARL5CA6NH57 179 aa20.82■□□□□ 0.92
NME3-207ENST00000564628 PI15O43692 258 aa20.82■□□□□ 0.92
NME3-207ENST00000564628 TSPAN1O60635 241 aa20.82■□□□□ 0.92
NME3-207ENST00000564628 N4BP1O75113 896 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms