RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 FMO1Q01740 532 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 POU5F1BQ06416 359 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 TUBB8Q3ZCM7 444 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 FAM90A1Q86YD7 464 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 ZGPATQ8N5A5 531 aaKnown RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 OR7D4Q8NG98 312 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 SLC35A4Q96G79 324 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 NOX5Q96PH1 765 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 DPH1Q9BZG8 443 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 VPS11Q9H270 941 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 ARMT1Q9H993 441 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 GPRC5DQ9NZD1 345 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 STAP2Q9UGK3 403 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 H3BUI4 141 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 KPNA5O15131 536 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 MTSS1O43312 755 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 CYP7B1O75881 506 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 PFKLP17858 780 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 CRHR1P34998 444 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 CTXN1P60606 82 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 TNFAIP2Q03169 654 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 SMAD4Q13485 552 aaKnown RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 MTM1Q13496 603 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 DAG1Q14118 895 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 RALBP1Q15311 655 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 CNGA2Q16280 664 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 SYDE1Q6ZW31 735 aaPredicted RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 CASKIN2Q8WXE0 1202 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 ZCCHC14Q8WYQ9 949 aaKnown RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 GFM2Q969S9 779 aaKnown RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 KIAA1191Q96A73 305 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 ZSWIM3Q96MP5 696 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 C14orf93Q9H972 538 aaKnown RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 ARFGAP3Q9NP61 516 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 PCMTD2Q9NV79 361 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 RGS17Q9UGC6 210 aaPredicted RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 LRCH1Q9Y2L9 728 aa3.17□□□□□ -1.9
CHD9-209ENST00000564255 MORC2Q9Y6X9 1032 aaPredicted RBP3.17□□□□□ -1.9
CHD9-209ENST00000564255 EN2P19622 333 aaPredicted RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 POLD1P28340 1107 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 GUCY1A2P33402 732 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 ADCY8P40145 1251 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 GRK6P43250 576 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 FAM209BQ5JX69 171 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 DACT2Q5SW24 774 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 EMC10Q5UCC4 262 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 GPR155Q7Z3F1 870 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 ZSWIM9Q86XI8 627 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 IGDCC3Q8IVU1 814 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 SMAP1Q8IYB5 467 aaPredicted RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 PQLC1Q8N2U9 271 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 KBTBD7Q8WVZ9 684 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 MTFMTQ96DP5 389 aaKnown RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 SUCLG2Q96I99 432 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 TMX3Q96JJ7 454 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 VRK1Q99986 396 aaPredicted RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 PDCD2LQ9BRP1 358 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 CORO2BQ9UQ03 480 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 CTDP1Q9Y5B0 961 aaPredicted RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 TEX51A0A1B0GUA7 166 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 A0A1W2PPL8 197 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 DDX3XO00571 662 aaKnown RBP eCLIP3.16□□□□□ -1.9
CHD9-209ENST00000564255 HYAL3O43820 417 aaPredicted RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 SH3BP5O60239 455 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 PRAMEF4O60810 478 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 ADAM23O75077 832 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 FGF18O76093 207 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 SYN1P17600 705 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 SLC7A1P30825 629 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 ETV4P43268 484 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 STT3AP46977 705 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 SARSP49591 514 aaKnown RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 HTRA4P83105 476 aaPredicted RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 SP140Q13342 867 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 ZNF827Q17R98 1081 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 CCDC157Q569K6 752 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 HIBCHQ6NVY1 386 aaPredicted RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 RSPH3Q86UC2 560 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 TRMT2AQ8IZ69 625 aaKnown RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 MZB1Q8WU39 189 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 TMEM41AQ96HV5 264 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 ENKD1Q9H0I2 346 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 LANCL2Q9NS86 450 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 ABCF2Q9UG63 623 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 FEZ2Q9UHY8 353 aaPredicted RBP3.16□□□□□ -1.9
CHD9-209ENST00000564255 DGKBQ9Y6T7 804 aa3.16□□□□□ -1.9
CHD9-209ENST00000564255 MYBBP1AQ9BQG0 1328 aaKnown RBP3.15□□□□□ -1.9
CHD9-209ENST00000564255 A0A087WV62 115 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 MYOCOSA0A1B0GUC4 107 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 C2orf78A6NCI8 922 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 F2RL2O00254 374 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 GASTP01350 101 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 ZNF28P17035 718 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 ITGB5P18084 799 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 ABCB4P21439 1286 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 PRDX5P30044 214 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 STAT5BP51692 787 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 ARFIP2P53365 341 aa3.15□□□□□ -1.9
CHD9-209ENST00000564255 MLLT6P55198 1093 aaPredicted RBP3.15□□□□□ -1.9
CHD9-209ENST00000564255 SUMO3P55854 103 aaPredicted RBP3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms