RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 WDR6Q9NNW5 1121 aaKnown RBP18.47■□□□□ 0.55
CCNF-203ENST00000564236 LRWD1Q9UFC0 647 aa18.47■□□□□ 0.55
CCNF-203ENST00000564236 PARP2Q9UGN5 583 aa18.47■□□□□ 0.55
CCNF-203ENST00000564236 LIMD1Q9UGP4 676 aa18.47■□□□□ 0.55
CCNF-203ENST00000564236 KMT2EQ8IZD2 1858 aa18.46■□□□□ 0.55
CCNF-203ENST00000564236 ZDBF2Q9HCK1 2354 aa18.46■□□□□ 0.55
CCNF-203ENST00000564236 CCT6AP40227 531 aaKnown RBP18.46■□□□□ 0.55
CCNF-203ENST00000564236 MRE11P49959 708 aa18.46■□□□□ 0.55
CCNF-203ENST00000564236 VCPP55072 806 aaKnown RBP18.46■□□□□ 0.55
CCNF-203ENST00000564236 ALYREFQ86V81 257 aaKnown RBP18.46■□□□□ 0.55
CCNF-203ENST00000564236 DEPTORQ8TB45 409 aa18.46■□□□□ 0.55
CCNF-203ENST00000564236 ADPGKQ9BRR6 497 aa18.46■□□□□ 0.55
CCNF-203ENST00000564236 RAB34Q9BZG1 259 aa18.46■□□□□ 0.55
CCNF-203ENST00000564236 ZDHHC7Q9NXF8 308 aa18.46■□□□□ 0.55
CCNF-203ENST00000564236 KLK14Q9P0G3 267 aa18.46■□□□□ 0.55
CCNF-203ENST00000564236 SF3B1O75533 1304 aaKnown RBP eCLIP18.46■□□□□ 0.55
CCNF-203ENST00000564236 RECQL4O94761 1208 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 THP07101 528 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 ASGR2P07307 311 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 PTGDRQ13258 359 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 GNL2Q13823 731 aaKnown RBP18.45■□□□□ 0.54
CCNF-203ENST00000564236 NBR1Q14596 966 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 DCAF4L1Q3SXM0 396 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 KCTD17Q8N5Z5 321 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 ZNF707Q96C28 371 aaPredicted RBP18.45■□□□□ 0.54
CCNF-203ENST00000564236 PAAF1Q9BRP4 392 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 SNTG2Q9NY99 539 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 KIAA1024Q9UPX6 916 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 PCDHB6Q9Y5E3 794 aa18.45■□□□□ 0.54
CCNF-203ENST00000564236 CCDC195A0A1B0GUA6 201 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 TMEM189-UBE2V1I3L0A0 370 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 TGM5O43548 720 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 N4BP1O75113 896 aaKnown RBP18.44■□□□□ 0.54
CCNF-203ENST00000564236 TADA2AO75478 443 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 PDGFBP01127 241 aaPredicted RBP18.44■□□□□ 0.54
CCNF-203ENST00000564236 RABEP1Q15276 862 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 EEF1DP3Q658K8 133 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 PIK3R5Q8WYR1 880 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 IFT74Q96LB3 600 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 IRF2BPLQ9H1B7 796 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.44■□□□□ 0.54
CCNF-203ENST00000564236 IGSF9Q9P2J2 1179 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 EPS15L1Q9UBC2 864 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 PHLPP2Q6ZVD8 1323 aa18.44■□□□□ 0.54
CCNF-203ENST00000564236 SPDYE4A6NLX3 237 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 KIF4AO95239 1232 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 ELAVL2Q12926 359 aaKnown RBP18.43■□□□□ 0.54
CCNF-203ENST00000564236 TDGQ13569 410 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 IL17AQ16552 155 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 RTP2Q5QGT7 225 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 NT5DC1Q5TFE4 455 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 DAW1Q8N136 415 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 SNX29Q8TEQ0 813 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 RIN2Q8WYP3 895 aaPredicted RBP18.43■□□□□ 0.54
CCNF-203ENST00000564236 STAMQ92783 540 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 B3GALT6Q96L58 329 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 NT5C3AQ9H0P0 336 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 SMOC2Q9H3U7 446 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 TMEM134Q9H6X4 195 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 C17orf75Q9HAS0 396 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 KCNK12Q9HB15 430 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 PTPRHQ9HD43 1115 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 DDX19AQ9NUU7 478 aaKnown RBP18.43■□□□□ 0.54
CCNF-203ENST00000564236 ARHGAP28Q9P2N2 729 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 DUSP12Q9UNI6 340 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 TNFSF13BQ9Y275 285 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 KIF3AQ9Y496 699 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 CLUHO75153 1309 aa18.43■□□□□ 0.54
CCNF-203ENST00000564236 TDRD15B5MCY1 1934 aaKnown RBP18.43■□□□□ 0.54
CCNF-203ENST00000564236 RFPL2O75678 378 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 XKR4Q5GH76 650 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 HYIQ5T013 277 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 ATF7IP2Q5U623 682 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 PDXDC1Q6P996 788 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 APBB1IPQ7Z5R6 666 aaPredicted RBP18.42■□□□□ 0.54
CCNF-203ENST00000564236 LNX1Q8TBB1 728 aaPredicted RBP18.42■□□□□ 0.54
CCNF-203ENST00000564236 NXPE3Q969Y0 559 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 PPP1R10Q96QC0 940 aaKnown RBP18.42■□□□□ 0.54
CCNF-203ENST00000564236 TTPALQ9BTX7 342 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 MMTAG2Q9BU76 263 aaKnown RBP18.42■□□□□ 0.54
CCNF-203ENST00000564236 KIFC3Q9BVG8 833 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 TIPINQ9BVW5 301 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 CXCL16Q9H2A7 254 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 FBXW11Q9UKB1 542 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 DNM3Q9UQ16 869 aa18.42■□□□□ 0.54
CCNF-203ENST00000564236 CASTOR2A6NHX0 329 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 POU2F2P09086 479 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 NPTX2P47972 431 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 CLCN5P51795 746 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 MAPK7Q13164 816 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 RILPL1Q5EBL4 403 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 KRT79Q5XKE5 535 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 ALKAL1Q6UXT8 129 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 C1orf186Q6ZWK4 172 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 SMG7Q92540 1137 aaKnown RBP18.41■□□□□ 0.54
CCNF-203ENST00000564236 KCNN1Q92952 543 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 DRC1Q96MC2 740 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 CLSTN3Q9BQT9 956 aa18.41■□□□□ 0.54
CCNF-203ENST00000564236 NTPCRQ9BSD7 190 aaKnown RBP18.41■□□□□ 0.54
CCNF-203ENST00000564236 PRKD2Q9BZL6 878 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms