RNA–Protein interactions for RNA: ENST00000563845.5

KLHDC4-211, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-211ENST00000563845 ANO5Q75V66 913 aa13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 GET4Q7L5D6 327 aaPredicted RBP13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 C1orf210Q8IVY1 113 aa13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 SLC44A3Q8N4M1 653 aa13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 MTMR9Q96QG7 549 aa13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 MYADMQ96S97 322 aa13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 TMEM60Q9H2L4 133 aa13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 PRG3Q9Y2Y8 225 aaPredicted RBP13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 COL4A3BPQ9Y5P4 624 aa13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 MAP1BP46821 2468 aaKnown RBP13.27□□□□□ -0.29
KLHDC4-211ENST00000563845 NRP1O14786 923 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 TEX28O15482 410 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 DDHD2O94830 711 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 ERLIN2O94905 339 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 SLITRK3O94933 977 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 LYPLA2O95372 231 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 POMCP01189 267 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 PRPHP41219 470 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 NPEPPSP55786 919 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 PDIA5Q14554 519 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 TMEM132AQ24JP5 1023 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 DCLRE1AQ6PJP8 1040 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 MCPH1Q8NEM0 835 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 PJA1Q8NG27 643 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 SNX29Q8TEQ0 813 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 HDAC7Q8WUI4 952 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 SHDQ96IW2 340 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 SH2D3AQ9BRG2 576 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 POLR3CQ9BUI4 534 aaPredicted RBP13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 PLEKHA4Q9H4M7 779 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 UBN1Q9NPG3 1134 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 BMP2KQ9NSY1 1161 aaPredicted RBP13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 DLL3Q9NYJ7 618 aa13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.26□□□□□ -0.294e-6■■■■□ 21.4
KLHDC4-211ENST00000563845 KMT2BQ9UMN6 2715 aaPredicted RBP13.26□□□□□ -0.29
KLHDC4-211ENST00000563845 TMEM150BA6NC51 233 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 SPTLC1O15269 473 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 USO1O60763 962 aaKnown RBP13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 NR1I2O75469 434 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 RFPL2O75678 378 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 SDHBP21912 280 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 RPA1P27694 616 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 OR1G1P47890 313 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 SPIRE1Q08AE8 756 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 ZRSR1Q15695 479 aaKnown RBP13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 MRPL10Q7Z7H8 261 aaKnown RBP13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 CNNM3Q8NE01 707 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 SNX21Q969T3 373 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 BORCS6Q96GS4 357 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 CEP89Q96ST8 783 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 SLC2A4RGQ9NR83 387 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 MARCH5Q9NX47 278 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 ZDHHC7Q9NXF8 308 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 DLGAP2Q9P1A6 1054 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 NCDNQ9UBB6 729 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 PCDHB6Q9Y5E3 794 aa13.25□□□□□ -0.29
KLHDC4-211ENST00000563845 C1RP00736 705 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 SRGAP2CP0DJJ0 459 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 LAMP2P13473 410 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 ITGA4P13612 1032 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 TXLNAP40222 546 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 DSG1Q02413 1049 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 CREMQ03060 361 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 HTR4Q13639 388 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 NBR1Q14596 966 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 PPP2R5AQ15172 486 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 ARL6IP4Q66PJ3 421 aaKnown RBP13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 SRGAP1Q7Z6B7 1085 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 ZBTB8OSQ8IWT0 167 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 HACE1Q8IYU2 909 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 PIGOQ8TEQ8 1089 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 SECISBP2LQ93073 1101 aaKnown RBP13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 TMEM143Q96AN5 459 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 CALML4Q96GE6 196 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 IFT74Q96LB3 600 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 HSD17B14Q9BPX1 270 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 NT5C3AQ9H0P0 336 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 ZSCAN16Q9H4T2 348 aaPredicted RBP13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 DHX33Q9H6R0 707 aaKnown RBP13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 IFT122Q9HBG6 1241 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 RXFP1Q9HBX9 757 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 DNM3Q9UQ16 869 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 ZFP37Q9Y6Q3 630 aaPredicted RBP13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 NUMBLQ9Y6R0 609 aa13.24□□□□□ -0.29
KLHDC4-211ENST00000563845 CHD8Q9HCK8 2581 aa13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 VWA3AA6NCI4 1184 aa13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 WNT7AO00755 349 aa13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 LAMTOR5O43504 91 aa13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 MYBP10242 640 aa13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 ATP2C1P98194 919 aaPredicted RBP13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 LAMTOR4Q0VGL1 99 aa13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 BECN1Q14457 450 aa13.23□□□□□ -0.29
KLHDC4-211ENST00000563845 PCBP1Q15365 356 aaKnown RBP eCLIP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms