RNA–Protein interactions for RNA: ENST00000563665.3

ZNF688-204, Transcript of zinc finger protein 688, humanhuman

TSL 1 (best)

Gene ZNF688, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-204ENST00000563665 CTCFP49711 727 aaPredicted RBP25.62■■□□□ 1.69
ZNF688-204ENST00000563665 MXI1P50539 228 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 MGAT3Q09327 533 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 CETN1Q12798 172 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 SURF1Q15526 300 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 DCAF4L1Q3SXM0 396 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 CCDC127Q96BQ5 260 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 CPB2Q96IY4 423 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 SENP6Q9GZR1 1112 aaPredicted RBP25.62■■□□□ 1.69
ZNF688-204ENST00000563665 TMEM8AQ9HCN3 771 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 FAM207AQ9NSI2 230 aaPredicted RBP25.62■■□□□ 1.69
ZNF688-204ENST00000563665 AGPAT5Q9NUQ2 364 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 ZKSCAN5Q9Y2L8 839 aa25.62■■□□□ 1.69
ZNF688-204ENST00000563665 LUC7L2Q9Y383 392 aaKnown RBP25.62■■□□□ 1.69
ZNF688-204ENST00000563665 ARVCFO00192 962 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 NRDCO43847 1150 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 PON1P27169 355 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 HOXA11P31270 313 aaPredicted RBP25.61■■□□□ 1.69
ZNF688-204ENST00000563665 ADKP55263 362 aaKnown RBP25.61■■□□□ 1.69
ZNF688-204ENST00000563665 ZBED6P86452 979 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 DPY19L2P1Q6NXN4 242 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 NOTUMQ6P988 496 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 CPLX3Q8WVH0 158 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 ARMC5Q96C12 935 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 ZNF333Q96JL9 665 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 ZNF830Q96NB3 372 aaPredicted RBP25.61■■□□□ 1.69
ZNF688-204ENST00000563665 FNBP1Q96RU3 617 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 CGRRF1Q99675 332 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 GANQ9H2C0 597 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 TMX1Q9H3N1 280 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 CEP72Q9P209 647 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 NOD1Q9Y239 953 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 DAAM1Q9Y4D1 1078 aa25.61■■□□□ 1.69
ZNF688-204ENST00000563665 FGFR4P22455 802 aa25.6■■□□□ 1.69
ZNF688-204ENST00000563665 KRT9P35527 623 aa25.6■■□□□ 1.69
ZNF688-204ENST00000563665 GCLMP48507 274 aa25.6■■□□□ 1.69
ZNF688-204ENST00000563665 CCZ1BP86790 482 aa25.6■■□□□ 1.69
ZNF688-204ENST00000563665 CCZ1P86791 482 aaPredicted RBP25.6■■□□□ 1.69
ZNF688-204ENST00000563665 LRMPQ12912 555 aa25.6■■□□□ 1.69
ZNF688-204ENST00000563665 TRIM71Q2Q1W2 868 aaKnown RBP25.6■■□□□ 1.69
ZNF688-204ENST00000563665 KRT39Q6A163 491 aa25.6■■□□□ 1.69
ZNF688-204ENST00000563665 TMEM117Q9H0C3 514 aa25.6■■□□□ 1.69
ZNF688-204ENST00000563665 TRMT13Q9NUP7 481 aaKnown RBP25.6■■□□□ 1.69
ZNF688-204ENST00000563665 FBXL5Q9UKA1 691 aa25.6■■□□□ 1.69
ZNF688-204ENST00000563665 COQ4Q9Y3A0 265 aa25.6■■□□□ 1.69
ZNF688-204ENST00000563665 RNF225M0QZC1 329 aaPredicted RBP25.59■■□□□ 1.69
ZNF688-204ENST00000563665 EPHB6O15197 1021 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 NOL4O94818 638 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 CLTAP09496 248 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 SLC9A1P19634 815 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 FECHP22830 423 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 TNFSF9P41273 254 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 GOLGA8FQ08AF8 430 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 GOLGA8DPQ0D2H9 430 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 EPC2Q52LR7 807 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 FAM26DQ5JW98 314 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 SLC27A1Q6PCB7 646 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 CDR2LQ86X02 465 aaPredicted RBP25.59■■□□□ 1.69
ZNF688-204ENST00000563665 ZNF397Q8NF99 534 aaPredicted RBP25.59■■□□□ 1.69
ZNF688-204ENST00000563665 DHX38Q92620 1227 aaKnown RBP25.59■■□□□ 1.69
ZNF688-204ENST00000563665 DNAJC7Q99615 494 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 CRISPLD2Q9H0B8 497 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 PDE11AQ9HCR9 933 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 ABHD10Q9NUJ1 306 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 CENPFP49454 3210 aa25.59■■□□□ 1.69
ZNF688-204ENST00000563665 IL18RAPO95256 599 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 CHRNA1P02708 482 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 DLATP10515 647 aaKnown RBP25.58■■□□□ 1.69
ZNF688-204ENST00000563665 LBX1P52954 281 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 AP3M2P53677 418 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 TRIM65Q6PJ69 517 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 C15orf39Q6ZRI6 1047 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 ZSCAN30Q86W11 494 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 THNSL1Q8IYQ7 743 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 OR8K1Q8NGG5 319 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 SIX2Q9NPC8 291 aa25.58■■□□□ 1.69
ZNF688-204ENST00000563665 HSPA1AP0DMV8 641 aaKnown RBP25.57■■□□□ 1.68
ZNF688-204ENST00000563665 HSPA1BP0DMV9 641 aaKnown RBP25.57■■□□□ 1.68
ZNF688-204ENST00000563665 THPOP40225 353 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 CDK7P50613 346 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 WNT7BP56706 349 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 ENOX2Q16206 610 aaKnown RBP25.57■■□□□ 1.68
ZNF688-204ENST00000563665 SEZ6Q53EL9 994 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 KLHDC7AQ5VTJ3 777 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 FAM228AQ86W67 206 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 TMEM139Q8IV31 216 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 WDR49Q8IV35 697 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 CEP120Q8N960 986 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 EHBP1Q8NDI1 1231 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 LMO3Q8TAP4 145 aa25.57■■□□□ 1.68
ZNF688-204ENST00000563665 POP1Q99575 1024 aaKnown RBP25.57■■□□□ 1.68
ZNF688-204ENST00000563665 NAA15Q9BXJ9 866 aaKnown RBP25.57■■□□□ 1.68
ZNF688-204ENST00000563665 INTS2Q9H0H0 1204 aaKnown RBP25.57■■□□□ 1.68
ZNF688-204ENST00000563665 RPF1Q9H9Y2 349 aaKnown RBP25.57■■□□□ 1.68
ZNF688-204ENST00000563665 TOPORSQ9NS56 1045 aaPredicted RBP25.57■■□□□ 1.68
ZNF688-204ENST00000563665 NOC2LQ9Y3T9 749 aaKnown RBP25.57■■□□□ 1.68
ZNF688-204ENST00000563665 B4GALT4O60513 344 aa25.56■■□□□ 1.68
ZNF688-204ENST00000563665 STAG3L1P0CL83 205 aa25.56■■□□□ 1.68
ZNF688-204ENST00000563665 GRM5P41594 1212 aa25.56■■□□□ 1.68
ZNF688-204ENST00000563665 SV2AQ7L0J3 742 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms