RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 MOXD1Q6UVY6 613 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 ZDHHC14Q8IZN3 488 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 DHX38Q92620 1227 aaKnown RBP12.64□□□□□ -0.39
ABCA3-203ENST00000563623 MIEF2Q96C03 454 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 TEKT3Q9BXF9 490 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 DNAJC18Q9H819 358 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 ETNK1Q9HBU6 452 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 PRR12Q9ULL5 1215 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 KRT15P19012 456 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 PEX3P56589 373 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 SEPT7Q16181 437 aaKnown RBP12.64□□□□□ -0.39
ABCA3-203ENST00000563623 ZNF449Q6P9G9 518 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 OTOP1Q7RTM1 612 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 LBHD1Q9BQE6 289 aaPredicted RBP12.64□□□□□ -0.39
ABCA3-203ENST00000563623 TDRD3Q9H7E2 651 aaKnown RBP12.64□□□□□ -0.39
ABCA3-203ENST00000563623 CHST7Q9NS84 486 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 HOMER2Q9NSB8 354 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 NYAP2Q9P242 653 aa12.64□□□□□ -0.39
ABCA3-203ENST00000563623 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 TMEM150BA6NC51 233 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 NOVP48745 357 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 SP4Q02446 784 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 SETDB1Q15047 1291 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 FAM102BQ5T8I3 360 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 MIGA2Q7L4E1 593 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 PRUNE1Q86TP1 453 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 XXYLT1Q8NBI6 393 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 FBF1Q8TES7 1133 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 PITPNM3Q9BZ71 974 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 ATP6V0A4Q9HBG4 840 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 TUFT1Q9NNX1 390 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 RREB1Q92766 1687 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 NCALDP61601 193 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 PLCB3Q01970 1234 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 RASA3Q14644 834 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 WLSQ5T9L3 541 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 APOBEC3HQ6NTF7 200 aaKnown RBP12.63□□□□□ -0.39
ABCA3-203ENST00000563623 TMEM179Q6ZVK1 233 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 CPXCR1Q8N123 301 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 ACCSQ96QU6 501 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 HSD17B14Q9BPX1 270 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 TXLNGYQ9BZA5 131 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
ABCA3-203ENST00000563623 ARL2BPQ9Y2Y0 163 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.63□□□□□ -0.39
ABCA3-203ENST00000563623 RASA4BC9J798 803 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 H0Y3Z8 333 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 RASA4O43374 803 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 ECE1P42892 770 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 MFAP3P55082 362 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 COPS2P61201 443 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 KIF22Q14807 665 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 C15orf52Q6ZUT6 534 aaKnown RBP12.63□□□□□ -0.39
ABCA3-203ENST00000563623 SLC17A8Q8NDX2 589 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 BICD1Q96G01 975 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 PI4K2AQ9BTU6 479 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 GPR88Q9GZN0 384 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 EHMT1Q9H9B1 1298 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 GPRC5CQ9NQ84 441 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 HSPBP1Q9NZL4 362 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 SEL1LQ9UBV2 794 aa12.63□□□□□ -0.39
ABCA3-203ENST00000563623 IPO5O00410 1097 aaKnown RBP12.62□□□□□ -0.39
ABCA3-203ENST00000563623 GSTA1P08263 222 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 KRT16P08779 473 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 STAT2P52630 851 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 DRG2P55039 364 aaKnown RBP12.62□□□□□ -0.39
ABCA3-203ENST00000563623 C11orf63Q6NUN7 778 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 BORCS6Q96GS4 357 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 VPS37BQ9H9H4 285 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 TOPORSQ9NS56 1045 aaPredicted RBP12.62□□□□□ -0.39
ABCA3-203ENST00000563623 KLHL11Q9NVR0 708 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.62□□□□□ -0.393e-6■■■■□ 23.8
ABCA3-203ENST00000563623 PCYOX1Q9UHG3 505 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 NENFQ9UMX5 172 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 KIF3CO14782 793 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 SLC26A4O43511 780 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 CEP55Q53EZ4 464 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 LLGL2Q6P1M3 1020 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 TRMT10CQ7L0Y3 403 aaKnown RBP12.62□□□□□ -0.39
ABCA3-203ENST00000563623 CPA5Q8WXQ8 436 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 KIFAP3Q92845 792 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 WRAP73Q9P2S5 460 aaPredicted RBP12.62□□□□□ -0.39
ABCA3-203ENST00000563623 PLIN4Q96Q06 1357 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 WDR91A4D1P6 747 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 DDX60LQ5H9U9 1706 aaKnown RBP12.62□□□□□ -0.39
ABCA3-203ENST00000563623 LMBRD2Q68DH5 695 aaPredicted RBP12.62□□□□□ -0.39
ABCA3-203ENST00000563623 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 CBWD2Q8IUF1 395 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 PASD1Q8IV76 773 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 SPDL1Q96EA4 605 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 SNF8Q96H20 258 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 MBOAT7Q96N66 472 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 NT5C1BQ96P26 610 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 KIFC3Q9BVG8 833 aa12.62□□□□□ -0.39
ABCA3-203ENST00000563623 G3BP2Q9UN86 482 aaKnown RBP12.62□□□□□ -0.39
ABCA3-203ENST00000563623 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.62□□□□□ -0.39
ABCA3-203ENST00000563623 ABCA3Q99758 1704 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms