RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 PTGESO14684 152 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 N4BP3O15049 544 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 TGM5O43548 720 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 GALR2O43603 387 aaPredicted RBP23.16■■□□□ 1.3
CHD9-208ENST00000563410 C1RP00736 705 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 TDGQ13569 410 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 HSP90AA2PQ14568 343 aaPredicted RBP23.16■■□□□ 1.3
CHD9-208ENST00000563410 TTC38Q5R3I4 469 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 LILRA6Q6PI73 481 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 C4orf32Q8N8J7 132 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 C2orf40Q9H1Z8 148 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.16■■□□□ 1.3
CHD9-208ENST00000563410 SNTG2Q9NY99 539 aa23.16■■□□□ 1.3
CHD9-208ENST00000563410 CLUHO75153 1309 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 ARHGEF35A5YM69 484 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 H0Y858 1186 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 PRKCBP05771 671 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 RPL17P18621 184 aaKnown RBP23.15■■□□□ 1.3
CHD9-208ENST00000563410 MUTP22033 750 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 NAMPTP43490 491 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 TUSC3Q13454 348 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 PRPF4BQ13523 1007 aaKnown RBP23.15■■□□□ 1.3
CHD9-208ENST00000563410 NAB2Q15742 525 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 RTP2Q5QGT7 225 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 ASTLQ6HA08 431 aaPredicted RBP23.15■■□□□ 1.3
CHD9-208ENST00000563410 GLYCTKQ8IVS8 523 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 RIN2Q8WYP3 895 aaPredicted RBP23.15■■□□□ 1.3
CHD9-208ENST00000563410 NT5C3AQ9H0P0 336 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 PLEKHA4Q9H4M7 779 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 POLD4Q9HCU8 107 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 DUSP12Q9UNI6 340 aa23.15■■□□□ 1.3
CHD9-208ENST00000563410 ACKR2O00590 384 aa23.14■■□□□ 1.29
CHD9-208ENST00000563410 TADA2AO75478 443 aa23.14■■□□□ 1.29
CHD9-208ENST00000563410 NBR1Q14596 966 aa23.14■■□□□ 1.29
CHD9-208ENST00000563410 MAPK6Q16659 721 aa23.14■■□□□ 1.29
CHD9-208ENST00000563410 EEF1DP3Q658K8 133 aa23.14■■□□□ 1.29
CHD9-208ENST00000563410 CWF19L1Q69YN2 538 aaKnown RBP23.14■■□□□ 1.29
CHD9-208ENST00000563410 ELMSAN1Q6PJG2 1045 aa23.14■■□□□ 1.29
CHD9-208ENST00000563410 NOSTRINQ8IVI9 506 aa23.14■■□□□ 1.29
CHD9-208ENST00000563410 SMG7Q92540 1137 aaKnown RBP23.14■■□□□ 1.29
CHD9-208ENST00000563410 ATOH1Q92858 354 aaPredicted RBP23.14■■□□□ 1.29
CHD9-208ENST00000563410 IRF2BPLQ9H1B7 796 aa23.14■■□□□ 1.29
CHD9-208ENST00000563410 IGSF9Q9P2J2 1179 aa23.14■■□□□ 1.29
CHD9-208ENST00000563410 CASTOR2A6NHX0 329 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 RECQL4O94761 1208 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 KIF4AO95239 1232 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 NPR3P17342 541 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 FXR2P51116 673 aaKnown RBP eCLIP23.13■■□□□ 1.29
CHD9-208ENST00000563410 HAUS3Q68CZ6 603 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 PRSS55Q6UWB4 352 aaPredicted RBP23.13■■□□□ 1.29
CHD9-208ENST00000563410 HASPINQ8TF76 798 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 RSAD2Q8WXG1 361 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 MYADMQ96S97 322 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 KIF2CQ99661 725 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 KIFC3Q9BVG8 833 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 MFSD1Q9H3U5 465 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 EPS15L1Q9UBC2 864 aa23.13■■□□□ 1.29
CHD9-208ENST00000563410 RIF1Q5UIP0 2472 aaKnown RBP23.13■■□□□ 1.29
CHD9-208ENST00000563410 SF3B1O75533 1304 aaKnown RBP eCLIP23.12■■□□□ 1.29
CHD9-208ENST00000563410 NARSO43776 548 aaKnown RBP23.12■■□□□ 1.29
CHD9-208ENST00000563410 THP07101 528 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 LIG1P18858 919 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 GBP2P32456 591 aaPredicted RBP23.12■■□□□ 1.29
CHD9-208ENST00000563410 TRAPPC10P48553 1259 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 RBM25P49756 843 aaKnown RBP23.12■■□□□ 1.29
CHD9-208ENST00000563410 CLCN5P51795 746 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 HMGN5P82970 282 aaKnown RBP23.12■■□□□ 1.29
CHD9-208ENST00000563410 CREMQ03060 361 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 DEPTORQ8TB45 409 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 STAMQ92783 540 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 ZSCAN31Q96LW9 406 aaPredicted RBP23.12■■□□□ 1.29
CHD9-208ENST00000563410 BHMT2Q9H2M3 363 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 ZDHHC7Q9NXF8 308 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 CFAP54Q96N23 3096 aa23.12■■□□□ 1.29
CHD9-208ENST00000563410 VPS13AQ96RL7 3174 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 MYH11P35749 1972 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 CCT6AP40227 531 aaKnown RBP23.11■■□□□ 1.29
CHD9-208ENST00000563410 PPP2R5AQ15172 486 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 TMEM132AQ24JP5 1023 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 CLSTN3Q9BQT9 956 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 ADPGKQ9BRR6 497 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 TTPALQ9BTX7 342 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 PRKD2Q9BZL6 878 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 LRWD1Q9UFC0 647 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 PTPRZ1P23471 2315 aaPredicted RBP23.11■■□□□ 1.29
CHD9-208ENST00000563410 CITO14578 2027 aa23.11■■□□□ 1.29
CHD9-208ENST00000563410 NOTCH4Q99466 2003 aa23.1■■□□□ 1.29
CHD9-208ENST00000563410 ZMYND10O75800 440 aa23.1■■□□□ 1.29
CHD9-208ENST00000563410 U2AF2P26368 475 aaKnown RBP eCLIP23.1■■□□□ 1.299e-7■■■□□ 15.7
CHD9-208ENST00000563410 TOB1P50616 345 aaPredicted RBP23.1■■□□□ 1.29
CHD9-208ENST00000563410 GNL2Q13823 731 aaKnown RBP23.1■■□□□ 1.29
CHD9-208ENST00000563410 NT5DC1Q5TFE4 455 aa23.1■■□□□ 1.29
CHD9-208ENST00000563410 FLCNQ8NFG4 579 aa23.1■■□□□ 1.29
CHD9-208ENST00000563410 LNX1Q8TBB1 728 aaPredicted RBP23.1■■□□□ 1.29
CHD9-208ENST00000563410 PIK3R5Q8WYR1 880 aa23.1■■□□□ 1.29
CHD9-208ENST00000563410 SH2B1Q9NRF2 756 aaPredicted RBP23.1■■□□□ 1.29
CHD9-208ENST00000563410 FBXW11Q9UKB1 542 aa23.1■■□□□ 1.29
CHD9-208ENST00000563410 KIAA1024Q9UPX6 916 aa23.1■■□□□ 1.29
CHD9-208ENST00000563410 GDAQ9Y2T3 454 aa23.1■■□□□ 1.29
CHD9-208ENST00000563410 PI15O43692 258 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms