RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 C16orf70Q9BSU1 422 aa10.55□□□□□ -0.72
UBFD1-202ENST00000563366 SUGCTQ9HAC7 445 aa10.55□□□□□ -0.72
UBFD1-202ENST00000563366 SPC25Q9HBM1 224 aa10.55□□□□□ -0.72
UBFD1-202ENST00000563366 RRAGDQ9NQL2 400 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-202ENST00000563366 FAM207AQ9NSI2 230 aaPredicted RBP10.55□□□□□ -0.72
UBFD1-202ENST00000563366 GNEQ9Y223 722 aaKnown RBP10.55□□□□□ -0.72
UBFD1-202ENST00000563366 STYXL1Q9Y6J8 313 aa10.55□□□□□ -0.72
UBFD1-202ENST00000563366 ADGRA3Q8IWK6 1321 aa10.55□□□□□ -0.72
UBFD1-202ENST00000563366 ZBTB42B2RXF5 422 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 C22orf31O95567 290 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 F2P00734 622 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 IGHA2P01877 340 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 ZNF865P0CJ78 1059 aaPredicted RBP10.54□□□□□ -0.72
UBFD1-202ENST00000563366 INSRRP14616 1297 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 HNRNPH3P31942 346 aaKnown RBP10.54□□□□□ -0.72
UBFD1-202ENST00000563366 GTF2H1P32780 548 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 CYLC1P35663 651 aaPredicted RBP10.54□□□□□ -0.72
UBFD1-202ENST00000563366 FMO5P49326 533 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 VAMP7P51809 220 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 SOX10P56693 466 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 MYL7Q01449 175 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 SP3Q02447 781 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 LAMTOR4Q0VGL1 99 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 PPFIA1Q13136 1202 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 SNRNP35Q16560 246 aaKnown RBP10.54□□□□□ -0.72
UBFD1-202ENST00000563366 MEA1Q16626 185 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 PTPN21Q16825 1174 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 DNTTIP2Q5QJE6 756 aaKnown RBP10.54□□□□□ -0.72
UBFD1-202ENST00000563366 GJC2Q5T442 439 aaPredicted RBP10.54□□□□□ -0.72
UBFD1-202ENST00000563366 EFCAB12Q6NXP0 572 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 CCAR2Q8N163 923 aaKnown RBP10.54□□□□□ -0.72
UBFD1-202ENST00000563366 METTL13Q8N6R0 699 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 ASAP3Q8TDY4 903 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 FBXL18Q96ME1 805 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 CBWD1Q9BRT8 395 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 KIFC3Q9BVG8 833 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 C1QTNF2Q9BXJ5 285 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 MRPL4Q9BYD3 311 aaKnown RBP10.54□□□□□ -0.72
UBFD1-202ENST00000563366 GCNT4Q9P109 453 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 SUCLA2Q9P2R7 463 aaPredicted RBP10.54□□□□□ -0.72
UBFD1-202ENST00000563366 PLAGL2Q9UPG8 496 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 NRCAMQ92823 1304 aa10.54□□□□□ -0.72
UBFD1-202ENST00000563366 ZNF233A6NK53 670 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 DYNC1LI2O43237 492 aaPredicted RBP10.53□□□□□ -0.72
UBFD1-202ENST00000563366 EXTL3O43909 919 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 ZEB2O60315 1214 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 DUSP11O75319 330 aaKnown RBP10.53□□□□□ -0.72
UBFD1-202ENST00000563366 RPLP2P05387 115 aaKnown RBP10.53□□□□□ -0.72
UBFD1-202ENST00000563366 CCDC172P0C7W6 258 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 ZNF286BP0CG31 522 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 KLRC1P26715 233 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 CYP2C19P33261 490 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 SKOR1P84550 965 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 PCBP1Q15365 356 aaKnown RBP eCLIP10.53□□□□□ -0.72
UBFD1-202ENST00000563366 NBPF20Q3BBV1 942 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 ZNF410Q86VK4 478 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 RHPN2Q8IUC4 686 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 RNF149Q8NC42 400 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 FAM174AQ8TBP5 190 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 FAM81BQ96LP2 452 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 PRIMPOLQ96LW4 560 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 LSM14BQ9BX40 385 aaKnown RBP10.53□□□□□ -0.72
UBFD1-202ENST00000563366 RNPEPQ9H4A4 650 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 LUC7LQ9NQ29 371 aaKnown RBP10.53□□□□□ -0.72
UBFD1-202ENST00000563366 PRMT7Q9NVM4 692 aaPredicted RBP10.53□□□□□ -0.72
UBFD1-202ENST00000563366 FLRT1Q9NZU1 646 aa10.53□□□□□ -0.72
UBFD1-202ENST00000563366 CDV3Q9UKY7 258 aaKnown RBP10.53□□□□□ -0.72
UBFD1-202ENST00000563366 BZW2Q9Y6E2 419 aaKnown RBP10.53□□□□□ -0.72
UBFD1-202ENST00000563366 ANKRD63C9JTQ0 380 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 CLDN3O15551 220 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 TOM1L1O75674 476 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 PRKCBP05771 671 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 GNAT1P11488 350 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 CYBAP13498 195 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 VARSP26640 1264 aaKnown RBP10.52□□□□□ -0.73
UBFD1-202ENST00000563366 ANXA13P27216 316 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 MATR3P43243 847 aaKnown RBP eCLIP10.52□□□□□ -0.73
UBFD1-202ENST00000563366 FLT3LGP49771 235 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 MXI1P50539 228 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 IGBP1P78318 339 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 KRT83P78385 493 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 KCNMA1Q12791 1236 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 SURF1Q15526 300 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 PTPN14Q15678 1187 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 GRIK4Q16099 956 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 CCL14Q16627 93 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 KYAT1Q16773 422 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 SLC9C1Q4G0N8 1177 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 TMEM63BQ5T3F8 832 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 E4F1Q66K89 784 aaPredicted RBP10.52□□□□□ -0.73
UBFD1-202ENST00000563366 MTHFD1LQ6UB35 978 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 TAS1R3Q7RTX0 852 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 APBB1IPQ7Z5R6 666 aaPredicted RBP10.52□□□□□ -0.73
UBFD1-202ENST00000563366 LRRC71Q8N4P6 559 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 MFSD14AQ96MC6 490 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 NLRP4Q96MN2 994 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 SPAG5Q96R06 1193 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 CCDC113Q9H0I3 377 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 PCIF1Q9H4Z3 704 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 AGPAT5Q9NUQ2 364 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms