RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 RPL13P26373 211 aaKnown RBP20.51■□□□□ 0.87
RAB40C-207ENST00000563109 LRRC63Q05C16 580 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 PAK1Q13153 545 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 TMCO2Q7Z6W1 182 aaPredicted RBP20.51■□□□□ 0.87
RAB40C-207ENST00000563109 GPD1LQ8N335 351 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 HELQQ8TDG4 1101 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 NELFBQ8WX92 580 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 SAAL1Q96ER3 474 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 RPS6KC1Q96S38 1066 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 KIAA1586Q9HCI6 787 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 ANO10Q9NW15 660 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 FNDC1Q4ZHG4 1894 aaPredicted RBP20.51■□□□□ 0.87
RAB40C-207ENST00000563109 GBF1Q92538 1859 aa20.51■□□□□ 0.87
RAB40C-207ENST00000563109 TLL1O43897 1013 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 EXTL3O43909 919 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 DGKIO75912 1065 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 MYBPC2Q14324 1141 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 NFIL3Q16649 462 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 EDRF1Q3B7T1 1238 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 DPCR1Q3MIW9 517 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 SEZ6Q53EL9 994 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 CENPPQ6IPU0 288 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 AGMOQ6ZNB7 445 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 CRIPAKQ8N1N5 446 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 XXYLT1Q8NBI6 393 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 FAM213AQ9BRX8 229 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 TMEM117Q9H0C3 514 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 RNF39Q9H2S5 420 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 SEMA6BQ9H3T3 888 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 RPF1Q9H9Y2 349 aaKnown RBP20.5■□□□□ 0.87
RAB40C-207ENST00000563109 INPP5FQ9Y2H2 1132 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 INSL6Q9Y581 213 aa20.5■□□□□ 0.87
RAB40C-207ENST00000563109 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-207ENST00000563109 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-207ENST00000563109 TBKBP1A7MCY6 615 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 MEIS3P2A8K0S8 358 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 FAM189A1O60320 539 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 EXOC3O60645 756 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 NR2F2P24468 414 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 MLH1P40692 756 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 ACOT2P49753 483 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 PPP2R3AQ06190 1150 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 ZCWPW2Q504Y3 356 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 CLLU1OSQ5K130 101 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 SLC9A9Q8IVB4 645 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 RAD9AQ99638 391 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 MRPL9Q9BYD2 267 aaKnown RBP20.49■□□□□ 0.87
RAB40C-207ENST00000563109 KLK14Q9P0G3 267 aa20.49■□□□□ 0.87
RAB40C-207ENST00000563109 CPSF3Q9UKF6 684 aaKnown RBP20.49■□□□□ 0.87
RAB40C-207ENST00000563109 COLQQ9Y215 455 aaPredicted RBP20.49■□□□□ 0.87
RAB40C-207ENST00000563109 TDRD15B5MCY1 1934 aaKnown RBP20.49■□□□□ 0.87
RAB40C-207ENST00000563109 COL4A6Q14031 1691 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 SYCE3A1L190 88 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 GOLGA8IPA6NC78 632 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 GOLGA8JA6NMD2 632 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 OFD1O75665 1012 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 CCDC192P0DO97 292 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 CXCL8P10145 99 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 TNFSF9P41273 254 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 POU5F1Q01860 360 aaKnown RBP20.48■□□□□ 0.87
RAB40C-207ENST00000563109 TYRO3Q06418 890 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 PAN2Q504Q3 1202 aaKnown RBP20.48■□□□□ 0.87
RAB40C-207ENST00000563109 NOMO2Q5JPE7 1267 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 CT47A1Q5JQC4 288 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-207ENST00000563109 ZBTB41Q5SVQ8 909 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 TMEM192Q8IY95 271 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 CMTR2Q8IYT2 770 aaKnown RBP20.48■□□□□ 0.87
RAB40C-207ENST00000563109 LRRC43Q8N309 656 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 TMEM174Q8WUU8 243 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 SNX27Q96L92 541 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 GAD1Q99259 594 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 RNF19AQ9NV58 838 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 RBAKQ9NYW8 714 aaPredicted RBP20.48■□□□□ 0.87
RAB40C-207ENST00000563109 RWDD2AQ9UIY3 292 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 FRMD4BQ9Y2L6 1034 aa20.48■□□□□ 0.87
RAB40C-207ENST00000563109 PDCD11Q14690 1871 aaKnown RBP20.47■□□□□ 0.87
RAB40C-207ENST00000563109 TRIM49BA6NDI0 452 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 ARL5CA6NH57 179 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 ZNF233A6NK53 670 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 CETN3O15182 167 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 GATMP50440 423 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 HTRA4P83105 476 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-207ENST00000563109 BTG3Q14201 252 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-207ENST00000563109 RAB30Q15771 203 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 ZSCAN23Q3MJ62 389 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 CEP135Q66GS9 1140 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 ANKRD40Q6AI12 368 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 FOXR2Q6PJQ5 311 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 ZNF689Q96CS4 500 aaPredicted RBP20.47■□□□□ 0.87
RAB40C-207ENST00000563109 FAM212AQ96EL1 285 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 PLEKHA5Q9HAU0 1116 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 KANSL3Q9P2N6 904 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 MSRAQ9UJ68 235 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 PCDHA11Q9Y5I1 949 aa20.47■□□□□ 0.87
RAB40C-207ENST00000563109 ANK1P16157 1881 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 GRXCR1A8MXD5 290 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 TULP1O00294 542 aaPredicted RBP20.46■□□□□ 0.87
RAB40C-207ENST00000563109 INPPL1O15357 1258 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 IL18RAPO95256 599 aa20.46■□□□□ 0.87
RAB40C-207ENST00000563109 RABGGTBP53611 331 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms