RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 GBP3Q9H0R5 595 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 OLFML3Q9NRN5 406 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 MARCH5Q9NX47 278 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 HPSEQ9Y251 543 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 PCDHGC5Q9Y5F6 944 aa20.48■□□□□ 0.87
CDH11-206ENST00000562998 FAM237AA0A1B0GTK4 181 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 NRP1O14786 923 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 POLR2DO15514 142 aaKnown RBP20.47■□□□□ 0.87
CDH11-206ENST00000562998 MEFVO15553 781 aaPredicted RBP20.47■□□□□ 0.87
CDH11-206ENST00000562998 ALDH2P05091 517 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 CMA1P23946 247 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 ADGRD2Q7Z7M1 963 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 DDX53Q86TM3 631 aaKnown RBP20.47■□□□□ 0.87
CDH11-206ENST00000562998 RNF168Q8IYW5 571 aaPredicted RBP20.47■□□□□ 0.87
CDH11-206ENST00000562998 HLA-CQ95604 372 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 TRIM9Q9C026 710 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 SCAND2PQ9GZW5 306 aaPredicted RBP20.47■□□□□ 0.87
CDH11-206ENST00000562998 ZHX3Q9H4I2 956 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 MAGEF1Q9HAY2 307 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 FAM13BQ9NYF5 915 aa20.47■□□□□ 0.87
CDH11-206ENST00000562998 PUF60Q9UHX1 559 aaKnown RBP20.47■□□□□ 0.87
CDH11-206ENST00000562998 VCANP13611 3396 aa20.46■□□□□ 0.87
CDH11-206ENST00000562998 ZC2HC1CQ53FD0 456 aaPredicted RBP20.46■□□□□ 0.87
CDH11-206ENST00000562998 SLC39A4Q6P5W5 647 aa20.46■□□□□ 0.87
CDH11-206ENST00000562998 STAMQ92783 540 aa20.46■□□□□ 0.87
CDH11-206ENST00000562998 PABPC5Q96DU9 382 aaKnown RBP20.46■□□□□ 0.87
CDH11-206ENST00000562998 TMEM169Q96HH4 297 aa20.46■□□□□ 0.87
CDH11-206ENST00000562998 FAM193BQ96PV7 902 aaPredicted RBP20.46■□□□□ 0.87
CDH11-206ENST00000562998 NGRNQ9NPE2 291 aaKnown RBP20.46■□□□□ 0.87
CDH11-206ENST00000562998 KCNH3Q9ULD8 1083 aa20.46■□□□□ 0.87
CDH11-206ENST00000562998 FAN1Q9Y2M0 1017 aa20.46■□□□□ 0.87
CDH11-206ENST00000562998 GDAQ9Y2T3 454 aa20.46■□□□□ 0.87
CDH11-206ENST00000562998 TRIP11Q15643 1979 aa20.46■□□□□ 0.87
CDH11-206ENST00000562998 NCK2O43639 380 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 FAM189A1O60320 539 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 GTF2F1P35269 517 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDH11-206ENST00000562998 NOLC1Q14978 699 aaKnown RBP eCLIP20.45■□□□□ 0.86
CDH11-206ENST00000562998 SKIV2LQ15477 1246 aaKnown RBP20.45■□□□□ 0.86
CDH11-206ENST00000562998 ZBTB33Q86T24 672 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 HVCN1Q96D96 273 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 PPP1R10Q96QC0 940 aaKnown RBP20.45■□□□□ 0.86
CDH11-206ENST00000562998 RPS6KC1Q96S38 1066 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 C7orf25Q9BPX7 421 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 TCF25Q9BQ70 676 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 LRRC27Q9C0I9 530 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 ZBP1Q9H171 429 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 UBE2ZQ9H832 354 aaPredicted RBP20.45■□□□□ 0.86
CDH11-206ENST00000562998 IRAK3Q9Y616 596 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 STYXL1Q9Y6J8 313 aa20.45■□□□□ 0.86
CDH11-206ENST00000562998 CLDN3O15551 220 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 THP07101 528 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 LTBRP36941 435 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 AMPD3Q01432 767 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 TFF2Q03403 129 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 EHHADHQ08426 723 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 ADAM15Q13444 863 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 TUSC3Q13454 348 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 KCNC3Q14003 757 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 MRPL43Q8N983 215 aaKnown RBP20.44■□□□□ 0.86
CDH11-206ENST00000562998 ASB2Q96Q27 587 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 PYM1Q9BRP8 204 aaKnown RBP20.44■□□□□ 0.86
CDH11-206ENST00000562998 TCHPQ9BT92 498 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 CCDC94Q9BW85 323 aaPredicted RBP20.44■□□□□ 0.86
CDH11-206ENST00000562998 FGFBP2Q9BYJ0 223 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 PANK4Q9NVE7 773 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 STK39Q9UEW8 545 aa20.44■□□□□ 0.86
CDH11-206ENST00000562998 CITO14578 2027 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 A0A0B4J269 797 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 A0A1W2PQ27 194 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 A0A1W2PQ64 194 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 A0A1W2PQD8 194 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 HIDE1A8MVS5 230 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 F8W810 466 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 HNRNPDLO14979 420 aaKnown RBP20.43■□□□□ 0.86
CDH11-206ENST00000562998 ACTN4O43707 911 aaKnown RBP20.43■□□□□ 0.86
CDH11-206ENST00000562998 CSPG5O95196 566 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 SLFN14P0C7P3 912 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 CTSAP10619 480 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 IDEP14735 1019 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 PFKFB1P16118 471 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 LIG4P49917 911 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 CASP5P51878 434 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 MRPS5P82675 430 aaKnown RBP20.43■□□□□ 0.86
CDH11-206ENST00000562998 DUSP6Q16828 381 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 SLC10A6Q3KNW5 377 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 HERC4Q5GLZ8 1057 aaPredicted RBP20.43■□□□□ 0.86
CDH11-206ENST00000562998 VPS52Q8N1B4 723 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 EFHBQ8N7U6 833 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 SNX27Q96L92 541 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 ACAP3Q96P50 834 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 PAAF1Q9BRP4 392 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 MRPL44Q9H9J2 332 aaKnown RBP20.43■□□□□ 0.86
CDH11-206ENST00000562998 TOPORSQ9NS56 1045 aaPredicted RBP20.43■□□□□ 0.86
CDH11-206ENST00000562998 CNTN3Q9P232 1028 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 ANKFY1Q9P2R3 1169 aa20.43■□□□□ 0.86
CDH11-206ENST00000562998 SMIM28A0A1B0GU29 152 aa20.42■□□□□ 0.86
CDH11-206ENST00000562998 A0A1B0GVL5 298 aa20.42■□□□□ 0.86
CDH11-206ENST00000562998 C2orf71A6NGG8 1288 aa20.42■□□□□ 0.86
CDH11-206ENST00000562998 ANKRD63C9JTQ0 380 aa20.42■□□□□ 0.86
CDH11-206ENST00000562998 LILRB3O75022 631 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms