RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 NPTXRO95502 500 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 EDN1P05305 212 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 KRT18P05783 430 aaKnown RBP18.2■□□□□ 0.5
CDT1-202ENST00000562747 SCP2P22307 547 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 STAT6P42226 847 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 ZNF131P52739 623 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 PTPN5P54829 565 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 KRT85P78386 507 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 CACNB1Q02641 598 aaPredicted RBP18.2■□□□□ 0.5
CDT1-202ENST00000562747 AXDND1Q5T1B0 1012 aaPredicted RBP18.2■□□□□ 0.5
CDT1-202ENST00000562747 TMEM184AQ6ZMB5 413 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 SV2BQ7L1I2 683 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 CDR2LQ86X02 465 aaPredicted RBP18.2■□□□□ 0.5
CDT1-202ENST00000562747 SUGP1Q8IWZ8 645 aaKnown RBP18.2■□□□□ 0.5
CDT1-202ENST00000562747 URGCPQ8TCY9 931 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 KCNN1Q92952 543 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 TCF25Q9BQ70 676 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 PARVGQ9HBI0 331 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 KANSL3Q9P2N6 904 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 LZTS1Q9Y250 596 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 GIT1Q9Y2X7 761 aa18.2■□□□□ 0.5
CDT1-202ENST00000562747 ZMYM2Q9UBW7 1377 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 A0A087X0B3 334 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 INPPL1O15357 1258 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 ME1P48163 572 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 NCKAP1LP55160 1127 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 PLCB3Q01970 1234 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 PTPN21Q16825 1174 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 DCAF4L1Q3SXM0 396 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 NT5DC1Q5TFE4 455 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 ATF7IP2Q5U623 682 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 PDE12Q6L8Q7 609 aaKnown RBP18.19■□□□□ 0.5
CDT1-202ENST00000562747 SHC4Q6S5L8 630 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 KCNT2Q6UVM3 1135 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 TAS1R3Q7RTX0 852 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 APBB1IPQ7Z5R6 666 aaPredicted RBP18.19■□□□□ 0.5
CDT1-202ENST00000562747 TMEM161BQ8NDZ6 487 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 ZNF558Q96NG5 402 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 MRPL4Q9BYD3 311 aaKnown RBP18.19■□□□□ 0.5
CDT1-202ENST00000562747 NXF3Q9H4D5 531 aaKnown RBP18.19■□□□□ 0.5
CDT1-202ENST00000562747 ENTPD7Q9NQZ7 604 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 TBC1D13Q9NVG8 400 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 FAM86C1Q9NVL1 165 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 PCDHA7Q9UN72 937 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 TNFSF13BQ9Y275 285 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 INPP5FQ9Y2H2 1132 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 HES2Q9Y543 173 aa18.19■□□□□ 0.5
CDT1-202ENST00000562747 FSD2A1L4K1 749 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 TBCAO75347 108 aaKnown RBP18.18■□□□□ 0.5
CDT1-202ENST00000562747 PDGFBP01127 241 aaPredicted RBP18.18■□□□□ 0.5
CDT1-202ENST00000562747 PPM1AP35813 382 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 NUCB2P80303 420 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 STRN3Q13033 797 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 MYCT1Q8N699 235 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 PDILTQ8N807 584 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 ACO2Q99798 780 aaKnown RBP18.18■□□□□ 0.5
CDT1-202ENST00000562747 PANK2Q9BZ23 570 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 RNF39Q9H2S5 420 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 CUEDC2Q9H467 287 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
CDT1-202ENST00000562747 TRAK2O60296 914 aa18.17■□□□□ 0.5
CDT1-202ENST00000562747 MAPTP10636 758 aaKnown RBP18.17■□□□□ 0.5
CDT1-202ENST00000562747 ABCD1P33897 745 aa18.17■□□□□ 0.5
CDT1-202ENST00000562747 RNASELQ05823 741 aaKnown RBP18.17■□□□□ 0.5
CDT1-202ENST00000562747 EEF1DP3Q658K8 133 aa18.17■□□□□ 0.5
CDT1-202ENST00000562747 DDX12PQ92771 950 aa18.17■□□□□ 0.5
CDT1-202ENST00000562747 APOL6Q9BWW8 343 aa18.17■□□□□ 0.5
CDT1-202ENST00000562747 NRDE2Q9H7Z3 1164 aa18.17■□□□□ 0.5
CDT1-202ENST00000562747 USP20Q9Y2K6 914 aa18.17■□□□□ 0.5
CDT1-202ENST00000562747 ARL5CA6NH57 179 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 MYMKA6NI61 221 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 ZC3H11AO75152 810 aaKnown RBP eCLIP18.16■□□□□ 0.52e-6■■■□□ 15
CDT1-202ENST00000562747 MLH1P40692 756 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 ALDH7A1P49419 539 aaKnown RBP18.16■□□□□ 0.5
CDT1-202ENST00000562747 BCAR1P56945 870 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 E2F4Q16254 413 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 RESP18Q5W5W9 173 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 DYMQ7RTS9 669 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 HAUS6Q7Z4H7 955 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 SLC39A11Q8N1S5 342 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 IQUBQ8NA54 791 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 LEO1Q8WVC0 666 aaPredicted RBP18.16■□□□□ 0.5
CDT1-202ENST00000562747 SPATA32Q96LK8 384 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 GAD1Q99259 594 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 LRRC27Q9C0I9 530 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 TNMDQ9H2S6 317 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 PTPRHQ9HD43 1115 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 FAM13BQ9NYF5 915 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 SPG21Q9NZD8 308 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 PARP2Q9UGN5 583 aa18.16■□□□□ 0.5
CDT1-202ENST00000562747 MYO15AQ9UKN7 3530 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 K7ENM7 598 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 SRGAP2BP0DMP2 458 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 AKAP5P24588 427 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 AFF1P51825 1210 aaKnown RBP18.15■□□□□ 0.5
CDT1-202ENST00000562747 KRT17Q04695 432 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 DNAJC19Q96DA6 116 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 FAM193BQ96PV7 902 aaPredicted RBP18.15■□□□□ 0.5
CDT1-202ENST00000562747 FIZ1Q96SL8 496 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 PYM1Q9BRP8 204 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms