RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LRRC57Q8N9N7 239 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 ACER1Q8TDN7 264 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 GATA6Q92908 595 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 TGS1Q96RS0 853 aaKnown RBP15□□□□□ -0.01
GTF3C1-203ENST00000562609 NAP1L3Q99457 506 aaPredicted RBP15□□□□□ -0.01
GTF3C1-203ENST00000562609 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
GTF3C1-203ENST00000562609 MRIQ9BWK5 157 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 EDEM3Q9BZQ6 932 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15□□□□□ -0.01
GTF3C1-203ENST00000562609 KCNK9Q9NPC2 374 aa15□□□□□ -0.01
GTF3C1-203ENST00000562609 MYMKA6NI61 221 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 hCG_1984214I3L0E3 225 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 SPATA31D3P0C874 917 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 UBTFL6P0CB48 400 aaPredicted RBP14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 ETS2P15036 469 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 FGFR4P22455 802 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 DEUP1Q05D60 604 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 KLHL30Q0D2K2 578 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 CCDC15Q0P6D6 951 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 DUPD1Q68J44 220 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 SLC30A10Q6XR72 485 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 SPATA31D4Q6ZUB0 917 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 ZNF713Q8N859 430 aaPredicted RBP14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 GLIS3Q8NEA6 775 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 MKL1Q969V6 931 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 ERP44Q9BS26 406 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 SPATA16Q9BXB7 569 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 KIAA1683Q9H0B3 1180 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 CUEDC2Q9H467 287 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 CEP72Q9P209 647 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 USP20Q9Y2K6 914 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 RPTORQ8N122 1335 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 HNRNPRO43390 633 aaKnown RBP14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 ATP5HO75947 161 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 GH1P01241 217 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 FGGP02679 453 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 CYP1A1P04798 512 aaPredicted RBP14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 DR1Q01658 176 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 SETDB1Q15047 1291 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 TMEM266Q2M3C6 531 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 KIAA1755Q5JYT7 1200 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 ZNF449Q6P9G9 518 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 CROCCP2Q86T23 111 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 ARHGAP18Q8N392 663 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 FAM133AQ8N9E0 248 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 KIAA0895Q8NCT3 520 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 CKAP2Q8WWK9 683 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 GLG1Q92896 1179 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 TMEM39BQ9GZU3 492 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 METTL5Q9NRN9 209 aaKnown RBP14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 DAAM1Q9Y4D1 1078 aa14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 BZW2Q9Y6E2 419 aaKnown RBP14.99□□□□□ -0.01
GTF3C1-203ENST00000562609 NOL4O94818 638 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 ZCCHC18P0CG32 403 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 STAT3P40763 770 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 CCNFP41002 786 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 KHDC1Q4VXA5 237 aaKnown RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 RASGEF1CQ8N431 466 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 CNOT7Q9UIV1 285 aaKnown RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 PCDHA12Q9UN75 941 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 USH1CQ9Y6N9 552 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 SPDYE2BA6NHP3 402 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 SPDYE6P0CI01 402 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 FKBP1AP62942 108 aaKnown RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 LRRC41Q15345 812 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 DLGAP5Q15398 846 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 TNFAIP8L3Q5GJ75 292 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 CENPPQ6IPU0 288 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 BTNL9Q6UXG8 535 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 SEPT14Q6ZU15 432 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 SV2BQ7L1I2 683 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 FBXO41Q8TF61 875 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 NRG4Q8WWG1 115 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 NCSTNQ92542 709 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 LARP4BQ92615 738 aaKnown RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 SYN2Q92777 582 aaPredicted RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 ARHGEF2Q92974 986 aaKnown RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 SLC4A7Q9Y6M7 1214 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 COL4A5P29400 1685 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 GREB1LQ9C091 1923 aaPredicted RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 MEIS2O14770 477 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 LMNAP02545 664 aaKnown RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 OCRLQ01968 901 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 MPP3Q13368 585 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 KRT79Q5XKE5 535 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 RSBN1LQ6PCB5 846 aaPredicted RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 ZDHHC24Q6UX98 284 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 OGFOD1Q8N543 542 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 INPP5DQ92835 1189 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 HIC2Q96JB3 615 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 IWS1Q96ST2 819 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 LSM14BQ9BX40 385 aaKnown RBP14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 MAF1Q9H063 256 aa14.98□□□□□ -0.01
GTF3C1-203ENST00000562609 MROH7Q68CQ1 1323 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 FOXO6A8MYZ6 492 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 LSAMPQ13449 338 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 PRPF4BQ13523 1007 aaKnown RBP14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 RCN1Q15293 331 aa14.97□□□□□ -0.01
GTF3C1-203ENST00000562609 VSTM1Q6UX27 236 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms