RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 MARCH5Q9NX47 278 aa16.87■□□□□ 0.29
CCNDBP1-203ENST00000562553 CACNG4Q9UBN1 327 aa16.87■□□□□ 0.29
CCNDBP1-203ENST00000562553 PUF60Q9UHX1 559 aaKnown RBP16.87■□□□□ 0.29
CCNDBP1-203ENST00000562553 KCNG1Q9UIX4 513 aa16.87■□□□□ 0.29
CCNDBP1-203ENST00000562553 PRG3Q9Y2Y8 225 aaPredicted RBP16.87■□□□□ 0.29
CCNDBP1-203ENST00000562553 F8W810 466 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 LINC01565O15544 149 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 HARSP12081 509 aaKnown RBP16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 OR1G1P47890 313 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 NRIP1P48552 1158 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 OSTNP61366 133 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 GRIK3Q13003 919 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 RESP18Q5W5W9 173 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 MPZL3Q6UWV2 235 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 RBM23Q86U06 439 aaKnown RBP16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 FAM178BQ8IXR5 827 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 PABPC5Q96DU9 382 aaKnown RBP16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 HAPLN2Q9GZV7 340 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 ENTPD7Q9NQZ7 604 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 CLDND1Q9NY35 253 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 ANKFY1Q9P2R3 1169 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 TBX20Q9UMR3 447 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 FAN1Q9Y2M0 1017 aa16.86■□□□□ 0.29
CCNDBP1-203ENST00000562553 HIDE1A8MVS5 230 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 H0YCG3 227 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 PER2O15055 1255 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 TOM1L1O75674 476 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 ALDH2P05091 517 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 MCF2P10911 925 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 KCNA5P22460 613 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 GRM5P41594 1212 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 KRT85P78386 507 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 CTC1Q2NKJ3 1217 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 ZC2HC1CQ53FD0 456 aaPredicted RBP16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 GLRA4Q5JXX5 417 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 ZPBP2Q6X784 338 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 EP400NLQ6ZTU2 488 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 TMC7Q7Z402 723 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 APBB1IPQ7Z5R6 666 aaPredicted RBP16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 DDX53Q86TM3 631 aaKnown RBP16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 VPS52Q8N1B4 723 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 AUTS2Q8WXX7 1259 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 RABGGTAQ92696 567 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 TCHPQ9BT92 498 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 ZBP1Q9H171 429 aa16.85■□□□□ 0.29
CCNDBP1-203ENST00000562553 CARNS1A5YM72 827 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 H3BQ06 376 aaPredicted RBP16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 POLR2DO15514 142 aaKnown RBP16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 MEFVO15553 781 aaPredicted RBP16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 TBX10O75333 385 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 IDEP14735 1019 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 LTBRP36941 435 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 RBM10P98175 930 aaKnown RBP16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 GTF2BQ00403 316 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 DLX2Q07687 328 aaPredicted RBP16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 NOLC1Q14978 699 aaKnown RBP eCLIP16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 NAB2Q15742 525 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 LEXMQ3ZCV2 418 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 SEZ6Q53EL9 994 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 PDE12Q6L8Q7 609 aaKnown RBP16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 PPP2R3CQ969Q6 453 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 BICD1Q96G01 975 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 SPATA32Q96LK8 384 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 PAAF1Q9BRP4 392 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 CCDC94Q9BW85 323 aaPredicted RBP16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 FGFBP2Q9BYJ0 223 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 TNMDQ9H2S6 317 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 TLE6Q9H808 572 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 KBTBD4Q9NVX7 518 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 TBC1D7Q9P0N9 293 aa16.84■□□□□ 0.29
CCNDBP1-203ENST00000562553 FRMD3A2A2Y4 597 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 CASTOR2A6NHX0 329 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 GLP2RO95838 553 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 PIGRP01833 764 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 COL9A1P20849 921 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 LIG4P49917 911 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 MCL1Q07820 350 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 ADAM15Q13444 863 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 DUSP6Q16828 381 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 SLC39A4Q6P5W5 647 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 ZNF720Q7Z2F6 126 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 MAP4K3Q8IVH8 894 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 EFHBQ8N7U6 833 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 IQUBQ8NA54 791 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 VN1R2Q8NFZ6 395 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 C1QTNF1Q9BXJ1 281 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 IKZF4Q9H2S9 585 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 CUEDC2Q9H467 287 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 ST6GALNAC4Q9H4F1 302 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 NGRNQ9NPE2 291 aaKnown RBP16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 FAM13BQ9NYF5 915 aa16.83■□□□□ 0.28
CCNDBP1-203ENST00000562553 ANK1P16157 1881 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 C2orf71A6NGG8 1288 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 TISP43B9A030 160 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 HNRNPDLO14979 420 aaKnown RBP16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 CLDN3O15551 220 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 PPP1R37O75864 691 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 THP07101 528 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 CTSAP10619 480 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 GAP43P17677 238 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms