RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 TDP2O95551 362 aa20.51■□□□□ 0.87
KATNB1-202ENST00000562542 RFC5P40937 340 aa20.51■□□□□ 0.87
KATNB1-202ENST00000562542 QARSP47897 775 aaKnown RBP20.51■□□□□ 0.87
KATNB1-202ENST00000562542 ADCY1Q08828 1119 aa20.51■□□□□ 0.87
KATNB1-202ENST00000562542 DMWDQ09019 674 aa20.51■□□□□ 0.87
KATNB1-202ENST00000562542 ZNF579Q8NAF0 562 aaKnown RBP20.51■□□□□ 0.87
KATNB1-202ENST00000562542 SLC7A14Q8TBB6 771 aa20.51■□□□□ 0.87
KATNB1-202ENST00000562542 HASPINQ8TF76 798 aa20.51■□□□□ 0.87
KATNB1-202ENST00000562542 TCP11Q8WWU5 503 aa20.51■□□□□ 0.87
KATNB1-202ENST00000562542 CSRNP2Q9H175 543 aa20.51■□□□□ 0.87
KATNB1-202ENST00000562542 SLKQ9H2G2 1235 aaPredicted RBP20.51■□□□□ 0.87
KATNB1-202ENST00000562542 NXF3Q9H4D5 531 aaKnown RBP20.51■□□□□ 0.87
KATNB1-202ENST00000562542 HEBP1Q9NRV9 189 aa20.51■□□□□ 0.87
KATNB1-202ENST00000562542 NDRG2Q9UN36 371 aaKnown RBP20.51■□□□□ 0.87
KATNB1-202ENST00000562542 INO80B-WBP1J3KQ70 363 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 DKC1O60832 514 aaKnown RBP eCLIP20.5■□□□□ 0.87
KATNB1-202ENST00000562542 AKAP5P24588 427 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 HOXA9P31269 272 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 NLRP5P59047 1200 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 GRIK3Q13003 919 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 HSP90AA2PQ14568 343 aaPredicted RBP20.5■□□□□ 0.87
KATNB1-202ENST00000562542 PSMD5Q16401 504 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 PABPC1LQ4VXU2 614 aaKnown RBP20.5■□□□□ 0.87
KATNB1-202ENST00000562542 B3GNT9Q6UX72 402 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 FERMT3Q86UX7 667 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 NPAS3Q8IXF0 933 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 TTPALQ9BTX7 342 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 DHX33Q9H6R0 707 aaKnown RBP20.5■□□□□ 0.87
KATNB1-202ENST00000562542 HCFC1R1Q9NWW0 138 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 CACNG4Q9UBN1 327 aa20.5■□□□□ 0.87
KATNB1-202ENST00000562542 RALYQ9UKM9 306 aaKnown RBP20.5■□□□□ 0.87
KATNB1-202ENST00000562542 TDRD15B5MCY1 1934 aaKnown RBP20.5■□□□□ 0.87
KATNB1-202ENST00000562542 ASAP2O43150 1006 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 EMC2Q15006 297 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 PCBP1Q15365 356 aaKnown RBP eCLIP20.49■□□□□ 0.87
KATNB1-202ENST00000562542 ADCK5Q3MIX3 580 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 FAM171A1Q5VUB5 890 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 CELF5Q8N6W0 485 aaKnown RBP20.49■□□□□ 0.87
KATNB1-202ENST00000562542 CLSTN3Q9BQT9 956 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 SLC26A6Q9BXS9 759 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 C22orf23Q9BZE7 217 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 KLK14Q9P0G3 267 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 PARP2Q9UGN5 583 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 KCNH3Q9ULD8 1083 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 MRPS23Q9Y3D9 190 aaKnown RBP20.49■□□□□ 0.87
KATNB1-202ENST00000562542 PPME1Q9Y570 386 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 DOCK6Q96HP0 2047 aa20.49■□□□□ 0.87
KATNB1-202ENST00000562542 RETP07949 1114 aa20.48■□□□□ 0.87
KATNB1-202ENST00000562542 AXDND1Q5T1B0 1012 aaPredicted RBP20.48■□□□□ 0.87
KATNB1-202ENST00000562542 ETNPPLQ8TBG4 499 aa20.48■□□□□ 0.87
KATNB1-202ENST00000562542 MCRS1Q96EZ8 462 aa20.48■□□□□ 0.87
KATNB1-202ENST00000562542 SEMA4GQ9NTN9 838 aa20.48■□□□□ 0.87
KATNB1-202ENST00000562542 EML1O00423 815 aa20.47■□□□□ 0.87
KATNB1-202ENST00000562542 LRP3O75074 770 aa20.47■□□□□ 0.87
KATNB1-202ENST00000562542 ECI2O75521 394 aa20.47■□□□□ 0.87
KATNB1-202ENST00000562542 GSTCDQ8NEC7 633 aa20.47■□□□□ 0.87
KATNB1-202ENST00000562542 LNX1Q8TBB1 728 aaPredicted RBP20.47■□□□□ 0.87
KATNB1-202ENST00000562542 PIK3R5Q8WYR1 880 aa20.47■□□□□ 0.87
KATNB1-202ENST00000562542 PLA2G2FQ9BZM2 168 aa20.47■□□□□ 0.87
KATNB1-202ENST00000562542 DNMT3BQ9UBC3 853 aaKnown RBP20.47■□□□□ 0.87
KATNB1-202ENST00000562542 DDX25Q9UHL0 483 aaKnown RBP20.47■□□□□ 0.87
KATNB1-202ENST00000562542 ANGPTL2Q9UKU9 493 aa20.47■□□□□ 0.87
KATNB1-202ENST00000562542 CYP3A7-CYP3A51PA0A087WV96 503 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 CASTOR2A6NHX0 329 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 ADAM12O43184 909 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 NPTXRO95502 500 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 CYP3A7P24462 503 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 PTENP60484 403 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 FZD5Q13467 585 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 TFDP1Q14186 410 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 KRT32Q14532 448 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 PRR23CQ6ZRP0 262 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 OTUD6AQ7L8S5 288 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.46■□□□□ 0.87
KATNB1-202ENST00000562542 MTRQ99707 1265 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 PAAF1Q9BRP4 392 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 RNF26Q9BY78 433 aaPredicted RBP20.46■□□□□ 0.87
KATNB1-202ENST00000562542 CHRDQ9H2X0 955 aa20.46■□□□□ 0.87
KATNB1-202ENST00000562542 MAN2B1O00754 1011 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 KIF4AO95239 1232 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 P4HBP07237 508 aaKnown RBP20.45■□□□□ 0.86
KATNB1-202ENST00000562542 HMGB1P09429 215 aaKnown RBP20.45■□□□□ 0.86
KATNB1-202ENST00000562542 TDGF1P13385 188 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 ARF4P18085 180 aaPredicted RBP20.45■□□□□ 0.86
KATNB1-202ENST00000562542 YWHABP31946 246 aaKnown RBP20.45■□□□□ 0.86
KATNB1-202ENST00000562542 CCR3P51677 355 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 TUSC3Q13454 348 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 SIM2Q14190 667 aaPredicted RBP20.45■□□□□ 0.86
KATNB1-202ENST00000562542 MXD4Q14582 209 aaPredicted RBP20.45■□□□□ 0.86
KATNB1-202ENST00000562542 XKR9Q5GH70 373 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 PDXDC1Q6P996 788 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 CDR2LQ86X02 465 aaPredicted RBP20.45■□□□□ 0.86
KATNB1-202ENST00000562542 RASEFQ8IZ41 740 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 DDX1Q92499 740 aaKnown RBP20.45■□□□□ 0.86
KATNB1-202ENST00000562542 BRF1Q92994 677 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 BRD9Q9H8M2 597 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 GDE1Q9NZC3 331 aa20.45■□□□□ 0.86
KATNB1-202ENST00000562542 WRAP73Q9P2S5 460 aaPredicted RBP20.45■□□□□ 0.86
KATNB1-202ENST00000562542 POU2F2P09086 479 aa20.44■□□□□ 0.86
KATNB1-202ENST00000562542 PPP2R5CQ13362 524 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms