RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 KLRC1P26715 233 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 NCKAP1LP55160 1127 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 VSNL1P62760 191 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 MYL7Q01449 175 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 TNFAIP2Q03169 654 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 PWP2Q15269 919 aaKnown RBP12.57□□□□□ -0.4
PCAT1-202ENST00000561978 GPIHBP1Q8IV16 184 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 XXYLT1Q8NBI6 393 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 KIFAP3Q92845 792 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 TLR10Q9BXR5 811 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 ABCB6Q9NP58 842 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 APEX2Q9UBZ4 518 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 DNAJC12Q9UKB3 198 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 LAMA2P24043 3122 aaKnown RBP12.57□□□□□ -0.4
PCAT1-202ENST00000561978 LAMA3Q16787 3333 aa12.57□□□□□ -0.4
PCAT1-202ENST00000561978 PDE4DIPQ5VU43 2346 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 A0A0A6YYK5 440 aaPredicted RBP12.56□□□□□ -0.4
PCAT1-202ENST00000561978 BACH1O14867 736 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 PMM2O15305 246 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 SORBS3O60504 671 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 PALMO75781 387 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 CCNE2O96020 404 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 VAMP7P51809 220 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 SMC1AQ14683 1233 aaKnown RBP12.56□□□□□ -0.4
PCAT1-202ENST00000561978 LY6KQ17RY6 165 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 FAM102BQ5T8I3 360 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 EGFL6Q8IUX8 553 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 COPS5Q92905 334 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 NTPCRQ9BSD7 190 aaKnown RBP12.56□□□□□ -0.4
PCAT1-202ENST00000561978 INTS2Q9H0H0 1204 aaKnown RBP12.56□□□□□ -0.4
PCAT1-202ENST00000561978 XPNPEP3Q9NQH7 507 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 DOCK5Q9H7D0 1870 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 GRID2IPA4D2P6 1211 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 F8VZ95 297 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 CES2O00748 559 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 MSCO60682 206 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 SASH3O75995 380 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 H2AFZP0C0S5 128 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 TXNP10599 105 aaKnown RBP12.56□□□□□ -0.4
PCAT1-202ENST00000561978 PEX3P56589 373 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
PCAT1-202ENST00000561978 DMP1Q13316 513 aaPredicted RBP12.56□□□□□ -0.4
PCAT1-202ENST00000561978 UGCGQ16739 394 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 CBWD6Q4V339 395 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 GLE1Q53GS7 698 aaKnown RBP12.56□□□□□ -0.4
PCAT1-202ENST00000561978 CBWD3Q5JTY5 395 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 CBWD5Q5RIA9 395 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 MEI1Q5TIA1 1274 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 H2AFVQ71UI9 128 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 SPATA4Q8NEY3 305 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 SCFD2Q8WU76 684 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 SPIRE2Q8WWL2 714 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 UBXN6Q9BZV1 441 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 IKZF4Q9H2S9 585 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
PCAT1-202ENST00000561978 H0YCG3 227 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 PDE2AO00408 941 aaPredicted RBP12.55□□□□□ -0.4
PCAT1-202ENST00000561978 EVI5O60447 810 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 KCNA2P16389 499 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 SCP2P22307 547 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 NPEPPSP55786 919 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 RTP1P59025 263 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 DRAP1Q14919 205 aaPredicted RBP12.55□□□□□ -0.4
PCAT1-202ENST00000561978 NFRKBQ6P4R8 1299 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 USP37Q86T82 979 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 RDH13Q8NBN7 331 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 MCPH1Q8NEM0 835 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 DIS3LQ8TF46 1054 aaKnown RBP12.55□□□□□ -0.4
PCAT1-202ENST00000561978 COG1Q8WTW3 980 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 TAF4BQ92750 862 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 CRISPLD2Q9H0B8 497 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 OGDHLQ9ULD0 1010 aa12.55□□□□□ -0.4
PCAT1-202ENST00000561978 GNEQ9Y223 722 aaKnown RBP12.55□□□□□ -0.4
PCAT1-202ENST00000561978 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 CCDC169A6NNP5 214 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 SPATA31C2B4DYI2 1134 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 SLC16A4O15374 487 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 DYNC1LI2O43237 492 aaPredicted RBP12.54□□□□□ -0.4
PCAT1-202ENST00000561978 DUSP11O75319 330 aaKnown RBP12.54□□□□□ -0.4
PCAT1-202ENST00000561978 DGAT1O75907 488 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 C6orf222P0C671 652 aaPredicted RBP12.54□□□□□ -0.4
PCAT1-202ENST00000561978 TRIM49P0CI25 452 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 TRIM49CP0CI26 452 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 NOP2P46087 812 aaKnown RBP12.54□□□□□ -0.4
PCAT1-202ENST00000561978 SP2Q02086 613 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 ENPEPQ07075 957 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 SLC20A2Q08357 652 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 TTLL4Q14679 1199 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 DUSP28Q4G0W2 176 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 IQSEC1Q6DN90 963 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 MIS18BP1Q6P0N0 1132 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 ANO5Q75V66 913 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 TLK2Q86UE8 772 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 SYCE1Q8N0S2 351 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 CALR3Q96L12 384 aaKnown RBP12.54□□□□□ -0.4
PCAT1-202ENST00000561978 CEP170P1Q96L14 293 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 PCIF1Q9H4Z3 704 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 VIPAS39Q9H9C1 493 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 JPH1Q9HDC5 661 aaPredicted RBP12.54□□□□□ -0.4
PCAT1-202ENST00000561978 GABBR1Q9UBS5 961 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms