RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CDCA2Q69YH5 1023 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-210ENST00000561817 TRMT1LQ7Z2T5 733 aaKnown RBP7.12□□□□□ -1.27
CAPN3-210ENST00000561817 SYCP3Q8IZU3 236 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 MSL3Q8N5Y2 521 aaKnown RBP7.12□□□□□ -1.27
CAPN3-210ENST00000561817 XXYLT1Q8NBI6 393 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 ACRBPQ8NEB7 543 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 PPTC7Q8NI37 304 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 OLIG1Q8TAK6 271 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 TMEM143Q96AN5 459 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 SGSM3Q96HU1 749 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 MFSD14AQ96MC6 490 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CCDC43Q96MW1 224 aaKnown RBP7.12□□□□□ -1.27
CAPN3-210ENST00000561817 TINF2Q9BSI4 451 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CRACR2AQ9BSW2 395 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 HAPLN2Q9GZV7 340 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 CCDC113Q9H0I3 377 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 MMRN2Q9H8L6 949 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 ZFYVE28Q9HCC9 887 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 HSPBP1Q9NZL4 362 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 FLRT1Q9NZU1 646 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 ARHGAP20Q9P2F6 1191 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 GJD2Q9UKL4 321 aa7.12□□□□□ -1.27
CAPN3-210ENST00000561817 EPN1Q9Y6I3 576 aaPredicted RBP7.12□□□□□ -1.27
CAPN3-210ENST00000561817 LRRC53A6NM62 1247 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 CCDC169A6NNP5 214 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 EIF3CLB5ME19 914 aaKnown RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 KIF2AO00139 706 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 ABLIM1O14639 778 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 WIPF1O43516 503 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 ADCY3O60266 1144 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 EXOC3O60645 756 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 ABL1P00519 1130 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 GH1P01241 217 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 TUBB4AP04350 444 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 LGALS2P05162 132 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 PLEKP08567 350 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 CCDC175P0C221 793 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 TRIM49P0CI25 452 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 TRIM49CP0CI26 452 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 HSPA8P11142 646 aaKnown RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 GARTP22102 1010 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 VARSP26640 1264 aaKnown RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 CNGA1P29973 690 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 ADCYAP1R1P41586 468 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 TM4SF4P48230 202 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 FMO5P49326 533 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 CTCFP49711 727 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 POLGP54098 1239 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 INHBEP58166 350 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 ETF1P62495 437 aaKnown RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 DLG4P78352 724 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 PPP3CAQ08209 521 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 BFSP1Q12934 665 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 ACVR2BQ13705 512 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 EXOC3L4Q17RC7 722 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 DUSP28Q4G0W2 176 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 EPC2Q52LR7 807 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 BRDTQ58F21 947 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 GBP6Q6ZN66 633 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 RRAGAQ7L523 313 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 IRF2BP2Q7Z5L9 587 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 CBWD2Q8IUF1 395 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 CCDC170Q8IYT3 715 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 ZNF511Q8NB15 262 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 NEK11Q8NG66 645 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 IFT74Q96LB3 600 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 PRIMPOLQ96LW4 560 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 EIF3CQ99613 913 aaKnown RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 C16orf70Q9BSU1 422 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 GPR88Q9GZN0 384 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 RNPEPQ9H4A4 650 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 SMARCAD1Q9H4L7 1026 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 PCIF1Q9H4Z3 704 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 NHEJ1Q9H9Q4 299 aaPredicted RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 AIPL1Q9NZN9 384 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 KCNG1Q9UIX4 513 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 MYO6Q9UM54 1294 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 NENFQ9UMX5 172 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 EXOC7Q9UPT5 735 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 FRMD4BQ9Y2L6 1034 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 TMA7Q9Y2S6 64 aaKnown RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 R3HCC1Q9Y3T6 440 aaKnown RBP7.11□□□□□ -1.27
CAPN3-210ENST00000561817 FHOD1Q9Y613 1164 aa7.11□□□□□ -1.27
CAPN3-210ENST00000561817 PHLPP2Q6ZVD8 1323 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 SSU72P8A0A1W2PR75 194 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 GOLGA6L9A6NEM1 432 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 H0YCG3 227 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 RBAK-RBAKDNI3L0D1 243 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 NOP56O00567 594 aaKnown RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 SPTLC1O15269 473 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 P4HA2O15460 535 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 GAS2O43903 313 aaKnown RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 FAM189A1O60320 539 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 HBP1O60381 514 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 MSCO60682 206 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 C22orf31O95567 290 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 ZNF865P0CJ78 1059 aaPredicted RBP7.1□□□□□ -1.27
CAPN3-210ENST00000561817 UCHL3P15374 230 aa7.1□□□□□ -1.27
CAPN3-210ENST00000561817 MARK3P27448 753 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms