RNA–Protein interactions for RNA: ENST00000561454.1

TCF12-227, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-227	ENST00000561454	SPO11	Q9Y5K1	396 aa		4.99	□□□□□ -1.61
TCF12-227	ENST00000561454	DIRC3	C9JPN6	131 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	CBX4	O00257	560 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	RNASET2	O00584	256 aa	Known RBP	4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	KIAA0355	O15063	1070 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	PRPF3	O43395	683 aa	Known RBP	4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	ATF3	P18847	181 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	CLK3	P49761	638 aa	Known RBP	4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	MRPL49	Q13405	166 aa	Known RBP	4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	CFAP100	Q494V2	611 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	CREB3L3	Q68CJ9	461 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	TMED8	Q6PL24	325 aa	Predicted RBP	4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	GDF7	Q7Z4P5	450 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	TCEAL8	Q8IYN2	117 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	CNTD1	Q8N815	330 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	PIK3C3	Q8NEB9	887 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	IL17RA	Q96F46	866 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	COQ10A	Q96MF6	247 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	CAMKK2	Q96RR4	588 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	ELF4	Q99607	663 aa	Predicted RBP	4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	EPC1	Q9H2F5	836 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	AASDHPPT	Q9NRN7	309 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	SYBU	Q9NX95	663 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	DKK2	Q9UBU2	259 aa		4.98	□□□□□ -1.61
TCF12-227	ENST00000561454	E2F8	A0AVK6	867 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	INO80B-WBP1	J3KQ70	363 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	ZEB2	O60315	1214 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	ABLIM3	O94929	683 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	SLC9A1	P19634	815 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	APOBEC3A	P31941	199 aa	Predicted RBP	4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	FLT3	P36888	993 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	BMPR1A	P36894	532 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	TMPRSS15	P98073	1019 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	FAM102B	Q5T8I3	360 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	SYDE2	Q5VT97	1194 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	NXN	Q6DKJ4	435 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	PASD1	Q8IV76	773 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	OR5M3	Q8NGP4	307 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	TTC1	Q99614	292 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	LSM14B	Q9BX40	385 aa	Known RBP	4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	INO80B	Q9C086	356 aa	Predicted RBP	4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	IFT22	Q9H7X7	185 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	CHST2	Q9Y4C5	530 aa		4.97	□□□□□ -1.61
TCF12-227	ENST00000561454	LPXN	O60711	386 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	RFPL1	O75677	317 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	APOL3	O95236	402 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	KRT18	P05783	430 aa	Known RBP	4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	TYRP1	P17643	537 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	GZMK	P49863	264 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	KRTAP10-11	P60412	298 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	BLOC1S1	P78537	153 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	FAM189B	P81408	668 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	HLTF	Q14527	1009 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	MLC1	Q15049	377 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	SYCP2L	Q5T4T6	812 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	PIK3R6	Q5UE93	754 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	CCDC62	Q6P9F0	684 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	UNQ6494/PRO21346	Q6UXR6	183 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	UBE2R2	Q712K3	238 aa	Predicted RBP	4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	GPRIN1	Q7Z2K8	1008 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	RD3	Q7Z3Z2	195 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	KIF18B	Q86Y91	864 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	PLXDC1	Q8IUK5	500 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	CBARP	Q8N350	705 aa	Predicted RBP	4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	LCORL	Q8N3X6	602 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	CDYL2	Q8N8U2	506 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	LINC00476	Q8WZB0	136 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	USP7	Q93009	1102 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	RHOBTB2	Q9BYZ6	727 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	WDR11	Q9BZH6	1224 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	POFUT1	Q9H488	388 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	AKIP1	Q9NQ31	210 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	TRPM5	Q9NZQ8	1165 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	NOB1	Q9ULX3	412 aa	Known RBP	4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	HDAC5	Q9UQL6	1122 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	SPEF1	Q9Y4P9	236 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	PCDHB6	Q9Y5E3	794 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	POLR2A	P24928	1970 aa	Known RBP	4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	MYPN	Q86TC9	1320 aa		4.96	□□□□□ -1.62
TCF12-227	ENST00000561454	ZNF891	A8MT65	544 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	PRKD3	O94806	890 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	SEC24D	O94855	1032 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	CFB	P00751	764 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	MYL1	P05976	194 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	CDK4	P11802	303 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	ZNF37A	P17032	561 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	CD40	P25942	277 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	CASR	P41180	1078 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	GPR15	P49685	360 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	ERCC6L	Q2NKX8	1250 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	BEAN1	Q3B7T3	259 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	INAVA	Q3KP66	663 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	CCDC178	Q5BJE1	867 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	TAS1R1	Q7RTX1	841 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	ZBTB46	Q86UZ6	589 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	NXPE1	Q8N323	547 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	MAGEB6	Q8N7X4	407 aa		4.95	□□□□□ -1.62
TCF12-227	ENST00000561454	OR2W6P	Q8NHA6	318 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms