RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TRIM21P19474 475 aaKnown RBP11.66□□□□□ -0.54
TPM1-229ENST00000561242 CASP1P29466 404 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 PBX2P40425 430 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 CYP2J2P51589 502 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 HTRA4P83105 476 aaPredicted RBP11.66□□□□□ -0.54
TPM1-229ENST00000561242 DPYDQ12882 1025 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 GRIK3Q13003 919 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 ZNF658Q5TYW1 1059 aaPredicted RBP11.66□□□□□ -0.54
TPM1-229ENST00000561242 CEP135Q66GS9 1140 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 PDE12Q6L8Q7 609 aaKnown RBP11.66□□□□□ -0.54
TPM1-229ENST00000561242 CLEC17AQ6ZS10 378 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 GPD1LQ8N335 351 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 TRIML1Q8N9V2 468 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 ZNF507Q8TCN5 953 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 KIF12Q96FN5 646 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 ANKRD36BP1Q96IX9 119 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 UROC1Q96N76 676 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 TMEM175Q9BSA9 504 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 OSBPL7Q9BZF2 842 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 CDT1Q9H211 546 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 NXF3Q9H4D5 531 aaKnown RBP11.66□□□□□ -0.54
TPM1-229ENST00000561242 PCIF1Q9H4Z3 704 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 HES2Q9Y543 173 aa11.66□□□□□ -0.54
TPM1-229ENST00000561242 FRMD3A2A2Y4 597 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 LINC01553A4QN01 128 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 EXTL3O43909 919 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 STX10O60499 249 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 PIGRP01833 764 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 TNNC2P02585 160 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 TMEM191BP0C7N4 346 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 MYOGP15173 224 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 SCNN1GP51170 649 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 POU5F1Q01860 360 aaKnown RBP11.65□□□□□ -0.54
TPM1-229ENST00000561242 ELAVL2Q12926 359 aaKnown RBP11.65□□□□□ -0.54
TPM1-229ENST00000561242 AMHR2Q16671 573 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 EPC2Q52LR7 807 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 EEF1DP3Q658K8 133 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 ISM2Q6H9L7 571 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 EP400NLQ6ZTU2 488 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 TMC7Q7Z402 723 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 XXYLT1Q8NBI6 393 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 RDH13Q8NBN7 331 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 ZBTB45Q96K62 511 aaPredicted RBP11.65□□□□□ -0.54
TPM1-229ENST00000561242 CASD1Q96PB1 797 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 NAT10Q9H0A0 1025 aaKnown RBP11.65□□□□□ -0.54
TPM1-229ENST00000561242 PRO3102Q9H379 93 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 SEMA6BQ9H3T3 888 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 ENTPD7Q9NQZ7 604 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 RBAKQ9NYW8 714 aaPredicted RBP11.65□□□□□ -0.54
TPM1-229ENST00000561242 MAGEC2Q9UBF1 373 aaPredicted RBP11.65□□□□□ -0.54
TPM1-229ENST00000561242 UBQLN1Q9UMX0 589 aaKnown RBP11.65□□□□□ -0.54
TPM1-229ENST00000561242 USP20Q9Y2K6 914 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 PCDHA5Q9Y5H7 936 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 DOCK5Q9H7D0 1870 aa11.65□□□□□ -0.54
TPM1-229ENST00000561242 MYH9P35579 1960 aaKnown RBP11.65□□□□□ -0.55
TPM1-229ENST00000561242 A0A0B4J269 797 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 FSD2A1L4K1 749 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 BIN1O00499 593 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 PDXKO00764 312 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 CLIC2O15247 247 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 EPB41P11171 864 aaKnown RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 FOSL2P15408 326 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 TNNI1P19237 187 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 PAX3P23760 479 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 RPL9P32969 192 aaKnown RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 MCM4P33991 863 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 ACOT2P49753 483 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 BCAR1P56945 870 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 ERVK-21P61565 698 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 TFAMQ00059 246 aaKnown RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 TAP1Q03518 808 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 UBE3AQ05086 875 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 CETN1Q12798 172 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 TUSC3Q13454 348 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 TRPC3Q13507 836 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 SNW1Q13573 536 aaKnown RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 TMEM132DQ14C87 1099 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 TCTN1Q2MV58 587 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 UBXN11Q5T124 520 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 KLHL10Q6JEL2 608 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 PDXDC1Q6P996 788 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 KCNT2Q6UVM3 1135 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 AGMOQ6ZNB7 445 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 NT5DC4Q86YG4 428 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 GUF1Q8N442 669 aaKnown RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 SMG8Q8ND04 991 aaKnown RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 ENGASEQ8NFI3 743 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 LINC01599Q8WXQ3 324 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 ZNF689Q96CS4 500 aaPredicted RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 DHTKD1Q96HY7 919 aaPredicted RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 LMAN2LQ9H0V9 348 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 CLSTN2Q9H4D0 955 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 ASB7Q9H672 318 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 TBC1D13Q9NVG8 400 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 MAPK8IP1Q9UQF2 711 aa11.64□□□□□ -0.55
TPM1-229ENST00000561242 YBX2Q9Y2T7 364 aaKnown RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 PRG3Q9Y2Y8 225 aaPredicted RBP11.64□□□□□ -0.55
TPM1-229ENST00000561242 MRPL42Q9Y6G3 142 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms