RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 CCDC94Q9BW85 323 aaPredicted RBP10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 PLVAPQ9BX97 442 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 TTYH1Q9H313 450 aaPredicted RBP10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 SEMA6BQ9H3T3 888 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 TYW1Q9NV66 732 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 TBC1D13Q9NVG8 400 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 PCDHA5Q9Y5H7 936 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 MRPL42Q9Y6G3 142 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 SCN1AP35498 2009 aa10.53□□□□□ -0.72
RABGGTA-221ENST00000561055 VWA8A3KMH1 1905 aa10.52□□□□□ -0.72
RABGGTA-221ENST00000561055 MYO7AQ13402 2215 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 KIAA0391O15091 583 aaKnown RBP10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 RECQL4O94761 1208 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 SMC2O95347 1197 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 CLTAP09496 248 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 POU3F3P20264 500 aaPredicted RBP10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 AKAP5P24588 427 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 BMPR1AP36894 532 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 AFF1P51825 1210 aaKnown RBP10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 DSC1Q08554 894 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 ZNF697Q5TEC3 545 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 TMEM192Q8IY95 271 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 GUF1Q8N442 669 aaKnown RBP10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 CEP120Q8N960 986 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 RNF169Q8NCN4 708 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 URGCPQ8TCY9 931 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 BICD1Q96G01 975 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 ACAP3Q96P50 834 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 TSPAN18Q96SJ8 248 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 GAD1Q99259 594 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 GBP3Q9H0R5 595 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 PLEKHA5Q9HAU0 1116 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 SLC39A2Q9NP94 309 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 RMND1Q9NWS8 449 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 MIOSQ9NXC5 875 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 SNTG2Q9NY99 539 aa10.52□□□□□ -0.73
RABGGTA-221ENST00000561055 CDH23Q9H251 3354 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 TTC26A0AVF1 554 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 H3BNC9 293 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 PTGESO14684 152 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 MEFVO15553 781 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 TGFB1I1O43294 461 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 KIF20AO95235 890 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 LDHAP00338 332 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 KCNE1P15382 129 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 LAG3P18627 525 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 GRIK3Q13003 919 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 NAB2Q15742 525 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 KNOP1Q1ED39 458 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 SLC10A6Q3KNW5 377 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 PAN2Q504Q3 1202 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 EPC2Q52LR7 807 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 ZNF658Q5TYW1 1059 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 CRELD2Q6UXH1 353 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 ZBTB33Q86T24 672 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 CD302Q8IX05 232 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 THNSL1Q8IYQ7 743 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 SYCP3Q8IZU3 236 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 SMARCE1Q969G3 411 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 ZFP42Q96MM3 310 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 TMEM175Q9BSA9 504 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 IKZF4Q9H2S9 585 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 KCTD10Q9H3F6 313 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 NRDE2Q9H7Z3 1164 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 AAASQ9NRG9 546 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 TOPORSQ9NS56 1045 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 LMCD1Q9NZU5 365 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 CNTN3Q9P232 1028 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 ANKFY1Q9P2R3 1169 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 PARP2Q9UGN5 583 aa10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 CPSF3Q9UKF6 684 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 AGO2Q9UKV8 859 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 PRRC2BQ5JSZ5 2229 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-221ENST00000561055 TISP43B9A030 160 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 PDXKO00764 312 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 DDHD2O94830 711 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 THP07101 528 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 MLH1P40692 756 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 MATR3P43243 847 aaKnown RBP eCLIP10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 YARSP54577 528 aaKnown RBP10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 PLCB3Q01970 1234 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 MYBPC2Q14324 1141 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 ZBTB6Q15916 424 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 NFIL3Q16649 462 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 SPRED2Q7Z698 418 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 ZNF280BQ86YH2 543 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 SLC9A9Q8IVB4 645 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 COLGALT2Q8IYK4 626 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 TRIML1Q8N9V2 468 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 COLGALT1Q8NBJ5 622 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 GOLGA5Q8TBA6 731 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 POMGNT1Q8WZA1 660 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 SNX27Q96L92 541 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 FBXL18Q96ME1 805 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 PPP1R10Q96QC0 940 aaKnown RBP10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 C17orf80Q9BSJ5 609 aa10.5□□□□□ -0.73
RABGGTA-221ENST00000561055 MSTO1Q9BUK6 570 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms