RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 POLD4Q9HCU8 107 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNX1-213ENST00000561026 SNTG2Q9NY99 539 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 PCDHB6Q9Y5E3 794 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 STK24Q9Y6E0 443 aa17.9■□□□□ 0.46
SNX1-213ENST00000561026 CCDC195A0A1B0GUA6 201 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 TADA2AO75478 443 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 PDGFBP01127 241 aaPredicted RBP17.89■□□□□ 0.45
SNX1-213ENST00000561026 EDN1P05305 212 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 LIG1P18858 919 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 AVPR2P30518 371 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 EFNA5P52803 228 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 VCPP55072 806 aaKnown RBP17.89■□□□□ 0.45
SNX1-213ENST00000561026 HSP90AA2PQ14568 343 aaPredicted RBP17.89■□□□□ 0.45
SNX1-213ENST00000561026 CYP26C1Q6V0L0 522 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 IFT74Q96LB3 600 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 PAAF1Q9BRP4 392 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 KIFC3Q9BVG8 833 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 RHOBTB2Q9BYZ6 727 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 SMOC2Q9H3U7 446 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 DDX19AQ9NUU7 478 aaKnown RBP17.89■□□□□ 0.45
SNX1-213ENST00000561026 FNIP2Q9P278 1114 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 CACNG4Q9UBN1 327 aa17.89■□□□□ 0.45
SNX1-213ENST00000561026 DAXXQ9UER7 740 aaPredicted RBP17.89■□□□□ 0.45
SNX1-213ENST00000561026 LAD1O00515 517 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 PTGESO14684 152 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 RECQL4O94761 1208 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 THP07101 528 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 SPATA31D3P0C874 917 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 MRE11P49959 708 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 PTPN5P54829 565 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 EEF1DP3Q658K8 133 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 SPATA31D4Q6ZUB0 917 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 PALB2Q86YC2 1186 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 SNX29Q8TEQ0 813 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 HDAC7Q8WUI4 952 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 RIN2Q8WYP3 895 aaPredicted RBP17.88■□□□□ 0.45
SNX1-213ENST00000561026 CXCL16Q9H2A7 254 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 PLEKHA4Q9H4M7 779 aa17.88■□□□□ 0.45
SNX1-213ENST00000561026 SF3B1O75533 1304 aaKnown RBP eCLIP17.87■□□□□ 0.454e-7■■■■■ 86.2
SNX1-213ENST00000561026 CASTOR2A6NHX0 329 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 TGM5O43548 720 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 PAPLNO95428 1278 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 MYBP10242 640 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 TCF15Q12870 199 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 RABEP1Q15276 862 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 NAB2Q15742 525 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 IL17AQ16552 155 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 DCAF4L1Q3SXM0 396 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 NT5DC1Q5TFE4 455 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 LILRA6Q6PI73 481 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 WDR6Q9NNW5 1121 aaKnown RBP17.87■□□□□ 0.45
SNX1-213ENST00000561026 DNM3Q9UQ16 869 aa17.87■□□□□ 0.45
SNX1-213ENST00000561026 K7ERI5 159 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 RFPL2O75678 378 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 RPL17P18621 184 aaKnown RBP17.86■□□□□ 0.45
SNX1-213ENST00000561026 PRPHP41219 470 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 CREMQ03060 361 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 RTP2Q5QGT7 225 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 ATF7IP2Q5U623 682 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 KRT79Q5XKE5 535 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 DTHD1Q6ZMT9 781 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 HASPINQ8TF76 798 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 ZNF707Q96C28 371 aaPredicted RBP17.86■□□□□ 0.45
SNX1-213ENST00000561026 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.86■□□□□ 0.45
SNX1-213ENST00000561026 GDAQ9Y2T3 454 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 KIF3AQ9Y496 699 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 CACNA1HO95180 2353 aa17.86■□□□□ 0.45
SNX1-213ENST00000561026 DENND4AQ7Z401 1863 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 PP2D1A8MPX8 630 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 E9PMD0 336 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 ST18O60284 1047 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 KIF4AO95239 1232 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 CDC25AP30304 524 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 PRSS55Q6UWB4 352 aaPredicted RBP17.85■□□□□ 0.45
SNX1-213ENST00000561026 GLYCTKQ8IVS8 523 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 SMG7Q92540 1137 aaKnown RBP17.85■□□□□ 0.45
SNX1-213ENST00000561026 STAMQ92783 540 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 TTPALQ9BTX7 342 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 NT5C3AQ9H0P0 336 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 KCNK12Q9HB15 430 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 ZDHHC7Q9NXF8 308 aa17.85■□□□□ 0.45
SNX1-213ENST00000561026 CCDC169A6NNP5 214 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 N4BP1O75113 896 aaKnown RBP17.84■□□□□ 0.45
SNX1-213ENST00000561026 NPTX2P47972 431 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 NUBP1P53384 320 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 PEX3P56589 373 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 TDGQ13569 410 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 RILPL1Q5EBL4 403 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 FAM171A1Q5VUB5 890 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 APBB1IPQ7Z5R6 666 aaPredicted RBP17.84■□□□□ 0.45
SNX1-213ENST00000561026 CEP57Q86XR8 500 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 DAW1Q8N136 415 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 PIK3R5Q8WYR1 880 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 MMTAG2Q9BU76 263 aaKnown RBP17.84■□□□□ 0.45
SNX1-213ENST00000561026 TNFSF13BQ9Y275 285 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 C2orf16Q68DN1 1984 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 PLXNA3P51805 1871 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 KMT2EQ8IZD2 1858 aa17.84■□□□□ 0.45
SNX1-213ENST00000561026 CLUHO75153 1309 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms