RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	SPDYE7P	Q495Y7	208 aa		5.24	□□□□□ -1.57
SLTM-223	ENST00000560532	AKNAD1	Q5T1N1	836 aa		5.24	□□□□□ -1.57
SLTM-223	ENST00000560532	LMBR1L	Q6UX01	489 aa		5.24	□□□□□ -1.57
SLTM-223	ENST00000560532	OR56A1	Q8NGH5	318 aa		5.24	□□□□□ -1.57
SLTM-223	ENST00000560532	PMFBP1	Q8TBY8	1022 aa		5.24	□□□□□ -1.57
SLTM-223	ENST00000560532	MDM1	Q8TC05	714 aa		5.24	□□□□□ -1.57
SLTM-223	ENST00000560532	MKL1	Q969V6	931 aa		5.24	□□□□□ -1.57
SLTM-223	ENST00000560532	SLC17A6	Q9P2U8	582 aa		5.24	□□□□□ -1.57
SLTM-223	ENST00000560532	NOX1	Q9Y5S8	564 aa		5.24	□□□□□ -1.57
SLTM-223	ENST00000560532	PRAMEF4	O60810	478 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	XPA	P23025	273 aa	Predicted RBP	5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	OCA2	Q04671	838 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	UBE3C	Q15386	1083 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	BMT2	Q1RMZ1	405 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	FNDC3B	Q53EP0	1204 aa	Known RBP	5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	ZBTB41	Q5SVQ8	909 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	SOGA3	Q5TF21	947 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	CREB3L3	Q68CJ9	461 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	MAPKAPK5	Q8IW41	473 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	RNF31	Q96EP0	1072 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	PDLIM2	Q96JY6	352 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	ZMAT4	Q9H898	229 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.23	□□□□□ -1.57
SLTM-223	ENST00000560532	SPO11	Q9Y5K1	396 aa		5.23	□□□□□ -1.57
SLTM-223	ENST00000560532		A0A1W2PR48	441 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	CBX4	O00257	560 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	JMJD7	P0C870	316 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	AGAP9	Q5VTM2	703 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	UBE2R2	Q712K3	238 aa	Predicted RBP	5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	GRASP	Q7Z6J2	395 aa	Predicted RBP	5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	ZZZ3	Q8IYH5	903 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	TMEM132C	Q8N3T6	1108 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	ZFP28	Q8NHY6	868 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	GAB3	Q8WWW8	586 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	CEP95	Q96GE4	821 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	ZSWIM1	Q9BR11	485 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	TBCCD1	Q9NVR7	557 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	OXSM	Q9NWU1	459 aa		5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	ARPP21	Q9UBL0	812 aa	Predicted RBP	5.22	□□□□□ -1.57
SLTM-223	ENST00000560532	DRGX	A6NNA5	263 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	NRP2	O60462	931 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	ITGA10	O75578	1167 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	PFKM	P08237	780 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	SDS	P20132	328 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	FLT3	P36888	993 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	CFAP100	Q494V2	611 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	PDPR	Q8NCN5	879 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	ZBTB9	Q96C00	473 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	AIFM2	Q9BRQ8	373 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	KRTAP2-2	Q9BYT5	123 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	KLHL11	Q9NVR0	708 aa		5.21	□□□□□ -1.58
SLTM-223	ENST00000560532	WIPF3	A6NGB9	483 aa		5.2	□□□□□ -1.58
SLTM-223	ENST00000560532	NRG3	P56975	720 aa		5.2	□□□□□ -1.58
SLTM-223	ENST00000560532	SRSF7	Q16629	238 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
SLTM-223	ENST00000560532	TSHZ3	Q63HK5	1081 aa		5.2	□□□□□ -1.58
SLTM-223	ENST00000560532	ESPNL	Q6ZVH7	1005 aa		5.2	□□□□□ -1.58
SLTM-223	ENST00000560532	RHOT2	Q8IXI1	618 aa		5.2	□□□□□ -1.58
SLTM-223	ENST00000560532	DNAJC2	Q99543	621 aa	Known RBP	5.2	□□□□□ -1.58
SLTM-223	ENST00000560532	HEPH	Q9BQS7	1158 aa		5.2	□□□□□ -1.58
SLTM-223	ENST00000560532	MANSC4	A6NHS7	340 aa	Predicted RBP	5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	PPP1R12A	O14974	1030 aa	Predicted RBP	5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	ONECUT2	O95948	504 aa		5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	LTA4H	P09960	611 aa	Known RBP	5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	ATP2A2	P16615	1042 aa	Known RBP	5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	CD40	P25942	277 aa		5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	MFSD14B	Q5SR56	506 aa		5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	SLC35B2	Q8TB61	432 aa		5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	DRC1	Q96MC2	740 aa		5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	OSBPL2	Q9H1P3	480 aa		5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	IFT57	Q9NWB7	429 aa		5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	ZKSCAN5	Q9Y2L8	839 aa		5.19	□□□□□ -1.58
SLTM-223	ENST00000560532	PPARA	Q07869	468 aa		5.18	□□□□□ -1.58
SLTM-223	ENST00000560532	EZH2	Q15910	746 aa	Known RBP	5.18	□□□□□ -1.58
SLTM-223	ENST00000560532	PRAMEF14	Q5SWL7	426 aa		5.18	□□□□□ -1.58
SLTM-223	ENST00000560532	ABHD15	Q6UXT9	468 aa		5.18	□□□□□ -1.58
SLTM-223	ENST00000560532	GLB1L2	Q8IW92	636 aa		5.18	□□□□□ -1.58
SLTM-223	ENST00000560532	UBXN4	Q92575	508 aa		5.18	□□□□□ -1.58
SLTM-223	ENST00000560532	UROC1	Q96N76	676 aa		5.18	□□□□□ -1.58
SLTM-223	ENST00000560532	MSRA	Q9UJ68	235 aa		5.18	□□□□□ -1.58
SLTM-223	ENST00000560532	CELA2A	P08217	269 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	CANX	P27824	592 aa	Known RBP	5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	GPR15	P49685	360 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	CXADR	P78310	365 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	SQSTM1	Q13501	440 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	MED25	Q71SY5	747 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	PTF1A	Q7RTS3	328 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	NXPE1	Q8N323	547 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	DPF1	Q92782	380 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	ZNF496	Q96IT1	587 aa	Predicted RBP	5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	CPNE5	Q9HCH3	593 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532	GPRC5D	Q9NZD1	345 aa		5.17	□□□□□ -1.58
SLTM-223	ENST00000560532		A0A1B0GTW7	788 aa		5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	LCHN	A4D1U4	455 aa		5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	KCNAB3	O43448	404 aa		5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	RAP2B	P61225	183 aa		5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	EXOSC10	Q01780	885 aa	Known RBP	5.16	□□□□□ -1.58
SLTM-223	ENST00000560532	CCDC178	Q5BJE1	867 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms