RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CD72P21854 359 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 NTHL1P78549 312 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 GRIK3Q13003 919 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 MXD4Q14582 209 aaPredicted RBP19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 ST3GAL2Q16842 350 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 PRSS55Q6UWB4 352 aaPredicted RBP19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 CEP57Q86XR8 500 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 ZNF579Q8NAF0 562 aaKnown RBP19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 KXD1Q9BQD3 176 aa19.83■□□□□ 0.77
TSPAN3-208ENST00000560514 NID2Q14112 1375 aa19.83■□□□□ 0.76
TSPAN3-208ENST00000560514 CPA1P15085 419 aa19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 IFNAR1P17181 557 aa19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 YWHABP31946 246 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 PPP2R5CQ13362 524 aa19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 XKR9Q5GH70 373 aa19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 TPRG1Q6ZUI0 275 aa19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 RABGGTAQ92696 567 aa19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 CHAMP1Q96JM3 812 aa19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 TTPALQ9BTX7 342 aa19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 FAM126AQ9BYI3 521 aaPredicted RBP19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 NXF3Q9H4D5 531 aaKnown RBP19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 PARP2Q9UGN5 583 aa19.82■□□□□ 0.76
TSPAN3-208ENST00000560514 LILRB5O75023 590 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 AKAP5P24588 427 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 HOXA9P31269 272 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 PTENP60484 403 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 HSP90AA2PQ14568 343 aaPredicted RBP19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 NTRK3Q16288 839 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 PSMD5Q16401 504 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 RTP2Q5QGT7 225 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 BLOC1S2Q6QNY1 142 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 TSSK4Q6SA08 328 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 ZNF852Q6ZMS4 543 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 C4orf19Q8IY42 314 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 BLIDQ8IZY5 108 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 FAM20AQ96MK3 541 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 JAKMIP1Q96N16 626 aaKnown RBP19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 LXNQ9BS40 222 aa19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 KMT2BQ9UMN6 2715 aaPredicted RBP19.81■□□□□ 0.76
TSPAN3-208ENST00000560514 RPS9P46781 194 aaKnown RBP19.8■□□□□ 0.76
TSPAN3-208ENST00000560514 PPP2R5DQ14738 602 aa19.8■□□□□ 0.76
TSPAN3-208ENST00000560514 FAM171A1Q5VUB5 890 aa19.8■□□□□ 0.76
TSPAN3-208ENST00000560514 PDXDC1Q6P996 788 aa19.8■□□□□ 0.76
TSPAN3-208ENST00000560514 ITFG1Q8TB96 612 aa19.8■□□□□ 0.76
TSPAN3-208ENST00000560514 HASPINQ8TF76 798 aa19.8■□□□□ 0.76
TSPAN3-208ENST00000560514 CLDN23Q96B33 292 aa19.8■□□□□ 0.76
TSPAN3-208ENST00000560514 KLK14Q9P0G3 267 aa19.8■□□□□ 0.76
TSPAN3-208ENST00000560514 COL4A3Q01955 1670 aa19.8■□□□□ 0.76
TSPAN3-208ENST00000560514 NPTXRO95502 500 aa19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 ARF4P18085 180 aaPredicted RBP19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 TARSP26639 723 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 NRLP54845 237 aa19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 CCT2P78371 535 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 SSRP1Q08945 709 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 ELAVL2Q12926 359 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 PABPC1LQ4VXU2 614 aaKnown RBP19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 SLC7A14Q8TBB6 771 aa19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 PIK3R5Q8WYR1 880 aa19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 CLSTN3Q9BQT9 956 aa19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 VAV3Q9UKW4 847 aa19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 KCNH3Q9ULD8 1083 aa19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 ARID2Q68CP9 1835 aa19.79■□□□□ 0.76
TSPAN3-208ENST00000560514 SLC37A4O43826 429 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 ADRB1P08588 477 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 ADCY1Q08828 1119 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 TUSC3Q13454 348 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 EPHA7Q15375 998 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 INF2Q27J81 1249 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 AXDND1Q5T1B0 1012 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 GALNT17Q6IS24 598 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 SLC27A1Q6PCB7 646 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 KRT25Q7Z3Z0 450 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 GSTCDQ8NEC7 633 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 NELL1Q92832 810 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 CCDC43Q96MW1 224 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 ZSWIM4Q9H7M6 989 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 WRAP73Q9P2S5 460 aaPredicted RBP19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 MRPS23Q9Y3D9 190 aaKnown RBP19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 ZMYM2Q9UBW7 1377 aa19.78■□□□□ 0.76
TSPAN3-208ENST00000560514 CASTOR2A6NHX0 329 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 ECI2O75521 394 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 MBTD1Q05BQ5 628 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 POU5F1BQ06416 359 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 SPEM2Q0P670 501 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 UVSSAQ2YD98 709 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 BMP2KLQ5H9B9 411 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 NCAPH2Q6IBW4 605 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 NPAS3Q8IXF0 933 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 LNX1Q8TBB1 728 aaPredicted RBP19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 ING5Q8WYH8 240 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 NCOA5Q9HCD5 579 aaKnown RBP19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 PRMT8Q9NR22 394 aaPredicted RBP19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 CACNG4Q9UBN1 327 aa19.77■□□□□ 0.76
TSPAN3-208ENST00000560514 CCDC194A0A1B0GVG4 234 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 CPLX1O14810 134 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 DEXIO95424 95 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 POU2F2P09086 479 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 GCFC2P16383 781 aaKnown RBP19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 MTAPQ13126 283 aa19.76■□□□□ 0.75
TSPAN3-208ENST00000560514 CTTNQ14247 550 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms