RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 DSC3Q14574 896 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 PCBP1Q15365 356 aaKnown RBP eCLIP8.8□□□□□ -1
LRRC28-219ENST00000560483 FAM43BQ6ZT52 329 aaPredicted RBP8.8□□□□□ -1
LRRC28-219ENST00000560483 USP49Q70CQ1 688 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 LRRC43Q8N309 656 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 KCTD17Q8N5Z5 321 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 BSNDQ8WZ55 320 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 DHX58Q96C10 678 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 RPS6KC1Q96S38 1066 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 C11orf84Q9BUA3 381 aaPredicted RBP8.8□□□□□ -1
LRRC28-219ENST00000560483 MRPL9Q9BYD2 267 aaKnown RBP8.8□□□□□ -1
LRRC28-219ENST00000560483 CCSER1Q9C0I3 900 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 TMEM117Q9H0C3 514 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 ELAC1Q9H777 363 aaKnown RBP8.8□□□□□ -1
LRRC28-219ENST00000560483 TYW1Q9NV66 732 aaKnown RBP8.8□□□□□ -1
LRRC28-219ENST00000560483 LARSQ9P2J5 1176 aaKnown RBP8.8□□□□□ -1
LRRC28-219ENST00000560483 KCNG1Q9UIX4 513 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 MRPL42Q9Y6G3 142 aaKnown RBP8.8□□□□□ -1
LRRC28-219ENST00000560483 WASF2Q9Y6W5 498 aa8.8□□□□□ -1
LRRC28-219ENST00000560483 FNDC1Q4ZHG4 1894 aaPredicted RBP8.79□□□□□ -1
LRRC28-219ENST00000560483 EPOPA6NHQ4 379 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 LPXNO60711 386 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 PPP6R2O75170 966 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 BRD1O95696 1058 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 POMCP01189 267 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 PLS3P13797 630 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 ARF4P18085 180 aaPredicted RBP8.79□□□□□ -1
LRRC28-219ENST00000560483 DDIT3P35638 169 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 NPTX2P47972 431 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 ALDH7A1P49419 539 aaKnown RBP8.79□□□□□ -1
LRRC28-219ENST00000560483 GSK3AP49840 483 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 SLC12A3P55017 1021 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 NUCB2P80303 420 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 HYIQ5T013 277 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 ATL3Q6DD88 541 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 SMYD5Q6GMV2 418 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 SLC27A1Q6PCB7 646 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 C1orf186Q6ZWK4 172 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 ZBTB33Q86T24 672 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 FAM178BQ8IXR5 827 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 CNNM3Q8NE01 707 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 NOC3LQ8WTT2 800 aaKnown RBP8.79□□□□□ -1
LRRC28-219ENST00000560483 STAMQ92783 540 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 CCDC51Q96ER9 411 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 PRIMPOLQ96LW4 560 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 REEP2Q9BRK0 252 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 EIF2AQ9BY44 585 aaKnown RBP8.79□□□□□ -1
LRRC28-219ENST00000560483 MRPL4Q9BYD3 311 aaKnown RBP8.79□□□□□ -1
LRRC28-219ENST00000560483 RSAD1Q9HA92 442 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 PARVGQ9HBI0 331 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 ALG13Q9NP73 1137 aaKnown RBP8.79□□□□□ -1
LRRC28-219ENST00000560483 KCND2Q9NZV8 630 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 ANKFY1Q9P2R3 1169 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 USP20Q9Y2K6 914 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 GDAQ9Y2T3 454 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 HES2Q9Y543 173 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 IPPQ9Y573 584 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 PHLPP2Q6ZVD8 1323 aa8.79□□□□□ -1
LRRC28-219ENST00000560483 TCHHQ07283 1943 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 H0YCG3 227 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 ACKR2O00590 384 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 POLR2DO15514 142 aaKnown RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 LAG3P18627 525 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 AKAP5P24588 427 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 GUCY2CP25092 1073 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 HOXA11P31270 313 aaPredicted RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 BMPR1AP36894 532 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 PBX3P40426 434 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 MLH1P40692 756 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 YARSP54577 528 aaKnown RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 OSTNP61366 133 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 USP46P62068 366 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 FAM189BP81408 668 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 AMPD3Q01432 767 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 KRT17Q04695 432 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 POU5F1BQ06416 359 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 ADGRE1Q14246 886 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 BMS1Q14692 1282 aaKnown RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 ZNF568Q3ZCX4 644 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 NOMO2Q5JPE7 1267 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 ATF7IP2Q5U623 682 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 CDCA2Q69YH5 1023 aaPredicted RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 CEP57L1Q8IYX8 460 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 IQUBQ8NA54 791 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 KLHL23Q8NBE8 558 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 PPP2R3CQ969Q6 453 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 ZNF689Q96CS4 500 aaPredicted RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 ZNF558Q96NG5 402 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 NFKBIZQ9BYH8 718 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 LRRC27Q9C0I9 530 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 NXF3Q9H4D5 531 aaKnown RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 IGFLR1Q9H665 355 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 MRPL44Q9H9J2 332 aaKnown RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 C17orf75Q9HAS0 396 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 UBN1Q9NPG3 1134 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 ENTPD7Q9NQZ7 604 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 KLK14Q9P0G3 267 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 TBC1D7Q9P0N9 293 aa8.78□□□□□ -1
LRRC28-219ENST00000560483 PUF60Q9UHX1 559 aaKnown RBP8.78□□□□□ -1
LRRC28-219ENST00000560483 ODF2LQ9ULJ1 636 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms