RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PRKCEQ02156 737 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 STKLD1Q8NE28 680 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 MRPL46Q9H2W6 279 aaKnown RBP14.26□□□□□ -0.13
TRAF3-208ENST00000560371 PREX1Q8TCU6 1659 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 TMPRSS15P98073 1019 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 SPARCL1Q14515 664 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 KCNB1Q14721 858 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 SERPINI1Q99574 410 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 MTFR1LQ9H019 292 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 FBXW4P57775 412 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 TPI1P60174 286 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 NOP14P78316 857 aaKnown RBP14.26□□□□□ -0.13
TRAF3-208ENST00000560371 THEMIS2Q5TEJ8 643 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 DRC3Q9H069 523 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 HSPBP1Q9NZL4 362 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 KCND2Q9NZV8 630 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 PIK3R2O00459 728 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 STMN1P16949 149 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 COPS2P61201 443 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 EGFL8Q99944 293 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 GOLPH3LQ9H4A5 285 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 ADARB2Q9NS39 739 aaKnown RBP14.26□□□□□ -0.13
TRAF3-208ENST00000560371 SNX24Q9Y343 169 aa14.26□□□□□ -0.13
TRAF3-208ENST00000560371 NPHP3-ACAD11A0A0J9YXS1 232 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 CXorf38Q8TB03 319 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 MED15Q96RN5 788 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 BPIFA3Q9BQP9 254 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 TRIM9Q9C026 710 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 TBX3O15119 743 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 ALDH1A3P47895 512 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 LCA5Q86VQ0 697 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 SH3TC2Q8TF17 1288 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 TUBB6Q9BUF5 446 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 VPS11Q9H270 941 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 FRMPD1Q5SYB0 1578 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 RASA4BC9J798 803 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 RASA4O43374 803 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 C9orf131Q5VYM1 1079 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 CFLARO15519 480 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 SCP2P22307 547 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 PCSK1P29120 753 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 GLE1Q53GS7 698 aaKnown RBP14.25□□□□□ -0.13
TRAF3-208ENST00000560371 PID1Q7Z2X4 250 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 PBXIP1Q96AQ6 731 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 UPF3AQ9H1J1 476 aaKnown RBP14.25□□□□□ -0.13
TRAF3-208ENST00000560371 ZNF212Q9UDV6 495 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 RFC5P40937 340 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 NOTUMQ6P988 496 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 EMBQ6PCB8 327 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 RNF135Q8IUD6 432 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 ZNF609O15014 1411 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 GPR75-ASB3A0A0A6YYF3 556 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 RASA1P20936 1047 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 SGSM1Q2NKQ1 1148 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 ANKRD20A4Q4UJ75 823 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 ANKRD20A8PQ5CZ79 823 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 ANKRD20A2Q5SQ80 823 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 ANKRD20A1Q5TYW2 823 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 RAPGEF5Q92565 580 aa14.25□□□□□ -0.13
TRAF3-208ENST00000560371 MOV10L1Q9BXT6 1211 aaKnown RBP14.25□□□□□ -0.13
TRAF3-208ENST00000560371 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.25□□□□□ -0.13
TRAF3-208ENST00000560371 KRT17Q04695 432 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 NNTQ13423 1086 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 PTK2BQ14289 1009 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 CCDC138Q96M89 665 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 MXRA8Q9BRK3 442 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 PDS5AQ29RF7 1337 aaKnown RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 APOL1O14791 398 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 EPHX2P34913 555 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 EXOSC10Q01780 885 aaKnown RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 SNRNP35Q16560 246 aaKnown RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 KPNA7A9QM74 516 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ALDH7A1P49419 539 aaKnown RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 GLYCTKQ8IVS8 523 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 RAB42Q8N4Z0 105 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 DCUN1D1Q96GG9 259 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ALDH8A1Q9H2A2 487 aaPredicted RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 PRMT7Q9NVM4 692 aaPredicted RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 SLC4A7Q9Y6M7 1214 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 SPECC1L-ADORA2AF8WAN1 911 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 CYP26A1O43174 497 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 CAPRIN1Q14444 709 aaKnown RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 EMC2Q15006 297 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 MGAT5BQ3V5L5 792 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ACBD5Q5T8D3 534 aaPredicted RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 PLA2G4FQ68DD2 849 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 XRRA1Q6P2D8 792 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 SHC4Q6S5L8 630 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 TAS2R42Q7RTR8 314 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ZC3H18Q86VM9 953 aaKnown RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 MORC4Q8TE76 937 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ZKSCAN4Q969J2 545 aaPredicted RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 SEPT5Q99719 369 aaPredicted RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 GTSE1Q9NYZ3 720 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 IL18RAPO95256 599 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ESRRAP11474 423 aaPredicted RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 RPS6P62753 249 aaKnown RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ZNF211Q13398 564 aaPredicted RBP14.24□□□□□ -0.13
TRAF3-208ENST00000560371 AGBL1Q96MI9 1066 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 REEP2Q9BRK0 252 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms