RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 TPCN2Q8NHX9 752 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 PCDHB18PQ96TA0 734 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 AGPAT1Q99943 283 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 TCHPQ9BT92 498 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 RNPEPQ9H4A4 650 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 ZNFX1Q9P2E3 1918 aaKnown RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 KRT5P13647 590 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 TCP1P17987 556 aaKnown RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 PRPF4BQ13523 1007 aaKnown RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 PLCB4Q15147 1175 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 CCDC62Q6P9F0 684 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 GPRC5AQ8NFJ5 357 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 SLC35G2Q8TBE7 412 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 HELQQ8TDG4 1101 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 EPS8L1Q8TE68 723 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 FNBP1Q96RU3 617 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 RBAKQ9NYW8 714 aaPredicted RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 ADAM21Q9UKJ8 722 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 CELF2O95319 508 aaKnown RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 ADCYAP1R1P41586 468 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 KIF22Q14807 665 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 C2CD6Q53TS8 623 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 TDRD10Q5VZ19 366 aaKnown RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 PHLDB2Q86SQ0 1253 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 PNMA8AQ86V59 439 aaPredicted RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 LRRC57Q8N9N7 239 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 MROH8Q9H579 483 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 RRAGCQ9HB90 399 aa15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 DMGDHQ9UI17 866 aaKnown RBP15.2■□□□□ 0.02
CARMIL3-203ENST00000560349 B4GALT5O43286 388 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 BUB1BO60566 1050 aaPredicted RBP15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 MAFO75444 373 aaPredicted RBP15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 GARTP22102 1010 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 LAMTOR4Q0VGL1 99 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 HDXQ7Z353 690 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 OR5B17Q8NGF7 314 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 COG5Q9UP83 839 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 UMODL1Q5DID0 1318 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 ZSCAN5CA6NGD5 496 aaPredicted RBP15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 TMEM110-MUSTN1A8MSY1 372 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 MAPK13O15264 365 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 EXTL3O43909 919 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 SNRPFP62306 86 aaKnown RBP15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 AFAP1L1Q8TED9 768 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 PSPC1Q8WXF1 523 aaKnown RBP15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 CTNNBL1Q8WYA6 563 aaPredicted RBP15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 NT5C1BQ96P26 610 aa15.19■□□□□ 0.02
CARMIL3-203ENST00000560349 P4HA2O15460 535 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 FTLP02792 175 aaPredicted RBP15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 CHRNB2P17787 502 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 CPNE8Q86YQ8 564 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 CEP120Q8N960 986 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 TMEM174Q8WUU8 243 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 PTPN18Q99952 460 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 ADCY3O60266 1144 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 PIK3CAP42336 1068 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 TUBB4BP68371 445 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 RPS6KA1Q15418 735 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 PEX26Q7Z412 305 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 ATP8B4Q8TF62 1192 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 BTBD6Q96KE9 485 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 MPHOSPH6Q99547 160 aaKnown RBP15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 MINDY3Q9H8M7 445 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 PNMA3Q9UL41 463 aa15.18■□□□□ 0.02
CARMIL3-203ENST00000560349 ESYT3A0FGR9 886 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 INO80B-WBP1J3KQ70 363 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 KIF4AO95239 1232 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 HLA-DRAP01903 254 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 RFC5P40937 340 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 PAFAH1B1P43034 410 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 GPC3P51654 580 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 MFAP3P55082 362 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 TTLL4Q14679 1199 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 TMEM132AQ24JP5 1023 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 C10orf76Q5T2E6 689 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 LLGL2Q6P1M3 1020 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 ADAT2Q7Z6V5 191 aaKnown RBP15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 FAM71AQ8IYT1 594 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 TMC2Q8TDI7 906 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 AFG1LQ8WV93 481 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 SHC3Q92529 594 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 AP1M1Q9BXS5 423 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 INO80BQ9C086 356 aaPredicted RBP15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 GBA2Q9HCG7 927 aaPredicted RBP15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 NOCTQ9UK39 431 aaKnown RBP15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 EVPLQ92817 2033 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 CLDN3O15551 220 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 CEP104O60308 925 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 ERLIN1O75477 346 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 VNN1O95497 513 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 SUCLA2Q9P2R7 463 aaPredicted RBP15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 IVNS1ABPQ9Y6Y0 642 aa15.17■□□□□ 0.02
CARMIL3-203ENST00000560349 A0A0B4J269 797 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 MSCO60682 206 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 CETPP11597 493 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 CYP11B1P15538 503 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 TNNT3P45378 269 aaPredicted RBP15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 FMO1Q01740 532 aa15.16■□□□□ 0.02
CARMIL3-203ENST00000560349 ARHGAP1Q07960 439 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms