RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 PCMTD1Q96MG8 357 aaPredicted RBP7□□□□□ -1.29
SPG11-221ENST00000560299 NAP1L5Q96NT1 182 aaPredicted RBP7□□□□□ -1.29
SPG11-221ENST00000560299 FNBP1Q96RU3 617 aa7□□□□□ -1.29
SPG11-221ENST00000560299 PPP1R9BQ96SB3 815 aa7□□□□□ -1.29
SPG11-221ENST00000560299 PPP1R16BQ96T49 567 aa7□□□□□ -1.29
SPG11-221ENST00000560299 CBWD1Q9BRT8 395 aa7□□□□□ -1.29
SPG11-221ENST00000560299 NUP58Q9BVL2 599 aa7□□□□□ -1.29
SPG11-221ENST00000560299 CELF4Q9BZC1 486 aaKnown RBP7□□□□□ -1.29
SPG11-221ENST00000560299 CCDC113Q9H0I3 377 aa7□□□□□ -1.29
SPG11-221ENST00000560299 ADAMTS10Q9H324 1103 aa7□□□□□ -1.29
SPG11-221ENST00000560299 ANKFY1Q9P2R3 1169 aa7□□□□□ -1.29
SPG11-221ENST00000560299 PRKAG2Q9UGJ0 569 aa7□□□□□ -1.29
SPG11-221ENST00000560299 TNFSF13BQ9Y275 285 aa7□□□□□ -1.29
SPG11-221ENST00000560299 BOLA1Q9Y3E2 137 aa7□□□□□ -1.29
SPG11-221ENST00000560299 TRPV2Q9Y5S1 764 aa7□□□□□ -1.29
SPG11-221ENST00000560299 CNTNAP2Q9UHC6 1331 aa7□□□□□ -1.29
SPG11-221ENST00000560299 ALPK3Q96L96 1907 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 A0A1B0GUA9 196 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 TULP1O00294 542 aaPredicted RBP6.99□□□□□ -1.29
SPG11-221ENST00000560299 GPR182O15218 404 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 OGTO15294 1046 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 P4HA2O15460 535 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 AP5Z1O43299 807 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 AFPP02771 609 aaKnown RBP6.99□□□□□ -1.29
SPG11-221ENST00000560299 MCF2P10911 925 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 ADSSP30520 456 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 GTF2H1P32780 548 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 THPOP40225 353 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 CASP4P49662 377 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 VAMP7P51809 220 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 AP3M2P53677 418 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 MCL1Q07820 350 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 TMEM62Q0P6H9 643 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 KCNH2Q12809 1159 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 BFSP2Q13515 415 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 TSR1Q2NL82 804 aaKnown RBP6.99□□□□□ -1.29
SPG11-221ENST00000560299 DCAF4L1Q3SXM0 396 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 LRIT3Q3SXY7 679 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 ZNF568Q3ZCX4 644 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 TRIM60Q495X7 471 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 NOTUMQ6P988 496 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 APTXQ7Z2E3 356 aaKnown RBP6.99□□□□□ -1.29
SPG11-221ENST00000560299 TMC6Q7Z403 805 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 VSTM4Q8IW00 320 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 HACE1Q8IYU2 909 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 SPC24Q8NBT2 197 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 ZNF397Q8NF99 534 aaPredicted RBP6.99□□□□□ -1.29
SPG11-221ENST00000560299 TMC2Q8TDI7 906 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 SAAL1Q96ER3 474 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 CCDC51Q96ER9 411 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 ZNF668Q96K58 619 aaPredicted RBP6.99□□□□□ -1.29
SPG11-221ENST00000560299 FBXL18Q96ME1 805 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 ERGIC2Q96RQ1 377 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 OSMRQ99650 979 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 FAM213AQ9BRX8 229 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 TRIM6Q9C030 488 aaPredicted RBP6.99□□□□□ -1.29
SPG11-221ENST00000560299 CDY2AQ9Y6F7 541 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 SIP14410 1827 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 ITIH6Q6UXX5 1313 aa6.99□□□□□ -1.29
SPG11-221ENST00000560299 GTPBP10A4D1E9 387 aaKnown RBP6.98□□□□□ -1.29
SPG11-221ENST00000560299 GOLGA8IPA6NC78 632 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 GOLGA8JA6NMD2 632 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 H0YGN5 161 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 TEX33O43247 280 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 TSPAN1O60635 241 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 EFCAB14O75071 495 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 RPS6KA5O75582 802 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 IL18RAPO95256 599 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 CXCL10P02778 98 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 CLTAP09496 248 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 ZSCAN20P17040 1043 aaPredicted RBP6.98□□□□□ -1.29
SPG11-221ENST00000560299 ARF4P18085 180 aaPredicted RBP6.98□□□□□ -1.29
SPG11-221ENST00000560299 TRIM21P19474 475 aaKnown RBP6.98□□□□□ -1.29
SPG11-221ENST00000560299 PROZP22891 400 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 YARSP54577 528 aaKnown RBP6.98□□□□□ -1.29
SPG11-221ENST00000560299 CYP24A1Q07973 514 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 HIC1Q14526 733 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 PSMD6Q15008 389 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 EXOC3L4Q17RC7 722 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 HS1BP3Q53T59 392 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 FAM26DQ5JW98 314 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 MIIPQ5JXC2 388 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 RASIP1Q5U651 963 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 SLC39A4Q6P5W5 647 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 SLC27A1Q6PCB7 646 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 GBP6Q6ZN66 633 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 ZBTB33Q86T24 672 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 FMNL3Q8IVF7 1028 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 CD302Q8IX05 232 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 RPUSD2Q8IZ73 545 aaKnown RBP6.98□□□□□ -1.29
SPG11-221ENST00000560299 TMEM199Q8N511 208 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 CCDC150Q8NCX0 1101 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 NEK11Q8NG66 645 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 PPP1R13LQ8WUF5 828 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 RSPH1Q8WYR4 309 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 SLC35C1Q96A29 364 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 BORCS6Q96GS4 357 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 ZBTB45Q96K62 511 aaPredicted RBP6.98□□□□□ -1.29
SPG11-221ENST00000560299 MFSD14AQ96MC6 490 aa6.98□□□□□ -1.29
SPG11-221ENST00000560299 CCDC94Q9BW85 323 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms