RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 MEFVO15553 781 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 ZSCAN22P10073 491 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 PROZP22891 400 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 IGFBP6P24592 240 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 OSTNP61366 133 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 GRIK3Q13003 919 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 COASYQ13057 564 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 SMAD4Q13485 552 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 GIT2Q14161 759 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 NAB2Q15742 525 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 PUS10Q3MIT2 529 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 GLRA4Q5JXX5 417 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 KRI1Q8N9T8 703 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 LINC00301Q8NCQ3 95 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 SMRP1Q8NCR6 262 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 LARP4BQ92615 738 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 B3GALT6Q96L58 329 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 RPS6KC1Q96S38 1066 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 CDCA3Q99618 268 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 APOL5Q9BWW9 433 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 CDH22Q9UJ99 828 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 HCFC2Q9Y5Z7 792 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 ZMYM2Q9UBW7 1377 aa12.79□□□□□ -0.36
RABGGTA-216ENST00000560243 CARNS1A5YM72 827 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 CASTOR2A6NHX0 329 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 C2CD2LO14523 706 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 LILRB3O75022 631 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 FAM13AO94988 1023 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 KRT18P05783 430 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 HARSP12081 509 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 EPCAMP16422 314 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 DDIT3P35638 169 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 ZNF131P52739 623 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 SMTNP53814 917 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 NCKAP1LP55160 1127 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 ZP2Q05996 745 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 STK38Q15208 465 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 SMAD2Q15796 467 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 SEZ6Q53EL9 994 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 ANKRD54Q6NXT1 300 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 KANK3Q6NY19 840 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 SYCE2Q6PIF2 218 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 TMEM184AQ6ZMB5 413 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 HAUS6Q7Z4H7 955 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 RNF168Q8IYW5 571 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 MYCT1Q8N699 235 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 FEZF2Q8TBJ5 459 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 HASPINQ8TF76 798 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 FIZ1Q96SL8 496 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 TCHPQ9BT92 498 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 HAPLN2Q9GZV7 340 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 ZHX3Q9H4I2 956 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 ODF2LQ9ULJ1 636 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 USP15Q9Y4E8 981 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 IRAK3Q9Y616 596 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 MORC2Q9Y6X9 1032 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 CITO14578 2027 aa12.78□□□□□ -0.36
RABGGTA-216ENST00000560243 MYMKA6NI61 221 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 SPTLC2O15270 562 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 BRD1O95696 1058 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 F13A1P00488 732 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 SOD2P04179 222 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 THP07101 528 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 CNPP09543 421 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 MCF2P10911 925 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 GRM5P41594 1212 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 STRN3Q13033 797 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 TUSC3Q13454 348 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 MPZL3Q6UWV2 235 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 DYMQ7RTS9 669 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 GJD3Q8N144 294 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 SLC22A17Q8WUG5 538 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 ZNF396Q96N95 335 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 KLHL5Q96PQ7 755 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 HERC2P3Q9BVR0 1158 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 COLEC11Q9BWP8 271 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 S1PR5Q9H228 398 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 PARVGQ9HBI0 331 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 LARSQ9P2J5 1176 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 ANKFY1Q9P2R3 1169 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 STK17AQ9UEE5 414 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 DAXXQ9UER7 740 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.37
RABGGTA-216ENST00000560243 PLXNA3P51805 1871 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 K7ENM7 598 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 TRAK2O60296 914 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 TBCAO75347 108 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 NR1I2O75469 434 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 TOM1L1O75674 476 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 KIF4AO95239 1232 aa12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 NMT1P30419 496 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 SSTR3P32745 418 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 SOX4Q06945 474 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 BMS1Q14692 1282 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 ZC2HC1CQ53FD0 456 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-216ENST00000560243 KIAA0319Q5VV43 1072 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms