RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 CUL4AQ13619 759 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 ZRSR1Q15695 479 aaKnown RBP22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 ATAT1Q5SQI0 421 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 FUT10Q6P4F1 479 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 GPR65Q8IYL9 337 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 DRC1Q96MC2 740 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 TIPINQ9BVW5 301 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 GPR62Q9BZJ7 368 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 NT5C3AQ9H0P0 336 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 C17orf75Q9HAS0 396 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 TNFSF13BQ9Y275 285 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 PHLPP2Q6ZVD8 1323 aa22.52■■□□□ 1.2
CHRNA3-207ENST00000559941 PTGESO14684 152 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 THP07101 528 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 ADH1AP07327 375 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 WEE2P0C1S8 567 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 GUCY2CP25092 1073 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 ZXDAP98168 799 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 DMP1Q13316 513 aaPredicted RBP22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 USP41Q3LFD5 358 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 CXCL16Q9H2A7 254 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 SFXN1Q9H9B4 322 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 ARHGAP28Q9P2N2 729 aa22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 RBM19Q9Y4C8 960 aaKnown RBP22.51■■□□□ 1.19
CHRNA3-207ENST00000559941 TEX28O15482 410 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 TADA2AO75478 443 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 HSP90AA2PQ14568 343 aaPredicted RBP22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 NAB2Q15742 525 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 TMC5Q6UXY8 1006 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 APBB1IPQ7Z5R6 666 aaPredicted RBP22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 GPR149Q86SP6 731 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 SYT2Q8N9I0 419 aaPredicted RBP22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 RABGGTAQ92696 567 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 ACO2Q99798 780 aaKnown RBP22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 PAAF1Q9BRP4 392 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 NTPCRQ9BSD7 190 aaKnown RBP22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 KMT5AQ9NQR1 393 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 GDAQ9Y2T3 454 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 CITO14578 2027 aa22.5■■□□□ 1.19
CHRNA3-207ENST00000559941 ZNF318Q5VUA4 2279 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 SP100P23497 879 aaPredicted RBP22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 TRIM67Q6ZTA4 783 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 TAS1R3Q7RTX0 852 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 BRAPQ7Z569 592 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 CDK5RAP3Q96JB5 506 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 AK8Q96MA6 479 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 PLIN2Q99541 437 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 MRPL4Q9BYD3 311 aaKnown RBP22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 TSHZ2Q9NRE2 1034 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 FNIP2Q9P278 1114 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 CACNG4Q9UBN1 327 aa22.49■■□□□ 1.19
CHRNA3-207ENST00000559941 CASTOR2A6NHX0 329 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 SPDYE4A6NLX3 237 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 SFI1A8K8P3 1242 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 C2CD4DB7Z1M9 353 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 SLC26A4O43511 780 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 BMP15O95972 392 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 C1RP00736 705 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 PLA2G4BP0C869 781 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 SLC12A3P55017 1021 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 PTPN21Q16825 1174 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 TMEM119Q4V9L6 283 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 HFE2Q6ZVN8 426 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 FEZF2Q8TBJ5 459 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 B3GALT6Q96L58 329 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 PTPRHQ9HD43 1115 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 KCND2Q9NZV8 630 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 DPP7Q9UHL4 492 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 KCNG1Q9UIX4 513 aa22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 SF3B1O75533 1304 aaKnown RBP eCLIP22.48■■□□□ 1.19
CHRNA3-207ENST00000559941 VWA8A3KMH1 1905 aa22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 GLUD1P00367 558 aa22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 C15orf39Q6ZRI6 1047 aa22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 BMP8AQ7Z5Y6 402 aa22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 CMASQ8NFW8 434 aaPredicted RBP22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 SPIRE2Q8WWL2 714 aa22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 RIN2Q8WYP3 895 aaPredicted RBP22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 TARS2Q9BW92 718 aaKnown RBP22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 CDT1Q9H211 546 aa22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 MAN1C1Q9NR34 630 aa22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 USTQ9Y2C2 406 aa22.47■■□□□ 1.19
CHRNA3-207ENST00000559941 MUC6Q6W4X9 2439 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 TMEM221A6NGB7 291 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 M0R296 226 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 SLC16A4O15374 487 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 KIF4AO95239 1232 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 PDCP20941 246 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 PLA2G5P39877 138 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 GRM5P41594 1212 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 RAD51AP2Q09MP3 1159 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 ZNF568Q3ZCX4 644 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 ELMSAN1Q6PJG2 1045 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 CEP120Q8N960 986 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 HDAC7Q8WUI4 952 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 MFSD14AQ96MC6 490 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 PPP1R10Q96QC0 940 aaKnown RBP22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 BACH2Q9BYV9 841 aa22.46■■□□□ 1.19
CHRNA3-207ENST00000559941 PLS3P13797 630 aa22.45■■□□□ 1.18
CHRNA3-207ENST00000559941 PROZP22891 400 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms