RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 BFSP1Q12934 665 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 MAN2A1Q16706 1144 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 UBXN11Q5T124 520 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 CRELD2Q6UXH1 353 aaPredicted RBP11.35□□□□□ -0.59
TPM1-221ENST00000559831 INTS8Q75QN2 995 aaKnown RBP11.35□□□□□ -0.59
TPM1-221ENST00000559831 DEFB128Q7Z7B8 93 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 TMEM174Q8WUU8 243 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 CCDC127Q96BQ5 260 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 FBXL18Q96ME1 805 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 TUBGCP2Q9BSJ2 902 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 APOL6Q9BWW8 343 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 IFIH1Q9BYX4 1025 aaKnown RBP11.35□□□□□ -0.59
TPM1-221ENST00000559831 WNT8AQ9H1J5 351 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 TMX1Q9H3N1 280 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 MMRN2Q9H8L6 949 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 CHST12Q9NRB3 414 aa11.35□□□□□ -0.59
TPM1-221ENST00000559831 RBAKQ9NYW8 714 aaPredicted RBP11.35□□□□□ -0.59
TPM1-221ENST00000559831 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM1-221ENST00000559831 TRIM43BA6NCK2 446 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 CBFA2T2O43439 604 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 FAM189A1O60320 539 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 MGEA5O60502 916 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 TRIM49P0CI25 452 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 TRIM49CP0CI26 452 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 CXCL8P10145 99 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 RAG1P15918 1043 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 VAMP7P51809 220 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 MARSP56192 900 aaKnown RBP11.34□□□□□ -0.59
TPM1-221ENST00000559831 KYAT1Q16773 422 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 VWA3BQ502W6 1294 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 SARM1Q6SZW1 724 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 BRSK2Q8IWQ3 736 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 TRIM59Q8IWR1 403 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 TMEM192Q8IY95 271 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 C7orf61Q8IZ16 206 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 SEPT8Q92599 483 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 TRIM43Q96BQ3 446 aaPredicted RBP11.34□□□□□ -0.59
TPM1-221ENST00000559831 BORCS6Q96GS4 357 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 MFSD14AQ96MC6 490 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 NAP1L5Q96NT1 182 aaPredicted RBP11.34□□□□□ -0.59
TPM1-221ENST00000559831 ACAP3Q96P50 834 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 ADAM2Q99965 735 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 CCDC94Q9BW85 323 aaPredicted RBP11.34□□□□□ -0.59
TPM1-221ENST00000559831 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
TPM1-221ENST00000559831 NXF3Q9H4D5 531 aaKnown RBP11.34□□□□□ -0.59
TPM1-221ENST00000559831 RPF1Q9H9Y2 349 aaKnown RBP11.34□□□□□ -0.59
TPM1-221ENST00000559831 SNTG2Q9NY99 539 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 CPSF3Q9UKF6 684 aaKnown RBP11.34□□□□□ -0.59
TPM1-221ENST00000559831 HES2Q9Y543 173 aa11.34□□□□□ -0.59
TPM1-221ENST00000559831 TDRD15B5MCY1 1934 aaKnown RBP11.33□□□□□ -0.6
TPM1-221ENST00000559831 KIAA0355O15063 1070 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 PARNO95453 639 aaKnown RBP11.33□□□□□ -0.6
TPM1-221ENST00000559831 ADCY5O95622 1261 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 TIMP1P01033 207 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 TPM3P06753 285 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 CLTAP09496 248 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 DLATP10515 647 aaKnown RBP11.33□□□□□ -0.6
TPM1-221ENST00000559831 GRM5P41594 1212 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 ZNF75DP51815 510 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 DLG4P78352 724 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 DSC3Q14574 896 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 GPNMBQ14956 572 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 PSMD6Q15008 389 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 ENOX2Q16206 610 aaKnown RBP11.33□□□□□ -0.6
TPM1-221ENST00000559831 PTPN21Q16825 1174 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 MIIPQ5JXC2 388 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 LMBRD2Q68DH5 695 aaPredicted RBP11.33□□□□□ -0.6
TPM1-221ENST00000559831 APTXQ7Z2E3 356 aaKnown RBP11.33□□□□□ -0.6
TPM1-221ENST00000559831 USP37Q86T82 979 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 DBF4BQ8NFT6 615 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 PLEKHO2Q8TD55 490 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 ANP32BQ92688 251 aaKnown RBP11.33□□□□□ -0.6
TPM1-221ENST00000559831 FNBP1Q96RU3 617 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 POP1Q99575 1024 aaKnown RBP11.33□□□□□ -0.6
TPM1-221ENST00000559831 NDST4Q9H3R1 872 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 PDE11AQ9HCR9 933 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 TOPORSQ9NS56 1045 aaPredicted RBP11.33□□□□□ -0.6
TPM1-221ENST00000559831 FAM105AQ9NUU6 356 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 PCDH10Q9P2E7 1040 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 PRKAG2Q9UGJ0 569 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 PARP2Q9UGN5 583 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 IPPQ9Y573 584 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 PCDHB2Q9Y5E7 798 aa11.33□□□□□ -0.6
TPM1-221ENST00000559831 LTBP2Q14767 1821 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 A0A1B0GTH6 734 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 LRRIQ3A6PVS8 624 aaPredicted RBP11.32□□□□□ -0.6
TPM1-221ENST00000559831 LGALS16A8MUM7 142 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 TEX33O43247 280 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 RECQL4O94761 1208 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 IL18RAPO95256 599 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 AFPP02771 609 aaKnown RBP11.32□□□□□ -0.6
TPM1-221ENST00000559831 ITGA4P13612 1032 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 TNNI1P19237 187 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 AKAP5P24588 427 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 ITGB8P26012 769 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 RFC2P35250 354 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 RAB27AP51159 221 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 YARSP54577 528 aaKnown RBP11.32□□□□□ -0.6
TPM1-221ENST00000559831 WNT7BP56706 349 aa11.32□□□□□ -0.6
TPM1-221ENST00000559831 UBXN1Q04323 297 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms