RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 DAW1Q8N136 415 aa20.78■□□□□ 0.92
CDC42BPB-206ENST00000559790 CCDC43Q96MW1 224 aaKnown RBP20.78■□□□□ 0.92
CDC42BPB-206ENST00000559790 NACC1Q96RE7 527 aa20.78■□□□□ 0.92
CDC42BPB-206ENST00000559790 TRIM6Q9C030 488 aaPredicted RBP20.78■□□□□ 0.92
CDC42BPB-206ENST00000559790 FAM86C1Q9NVL1 165 aa20.78■□□□□ 0.92
CDC42BPB-206ENST00000559790 TSC2P49815 1807 aa20.77■□□□□ 0.92
CDC42BPB-206ENST00000559790 SPATA31D3P0C874 917 aa20.77■□□□□ 0.92
CDC42BPB-206ENST00000559790 RPL17P18621 184 aaKnown RBP20.77■□□□□ 0.92
CDC42BPB-206ENST00000559790 U2AF2P26368 475 aaKnown RBP eCLIP20.77■□□□□ 0.92
CDC42BPB-206ENST00000559790 NAMPTP43490 491 aa20.77■□□□□ 0.92
CDC42BPB-206ENST00000559790 IL17AQ16552 155 aa20.77■□□□□ 0.92
CDC42BPB-206ENST00000559790 SPATA31D4Q6ZUB0 917 aa20.77■□□□□ 0.92
CDC42BPB-206ENST00000559790 GPR65Q8IYL9 337 aa20.77■□□□□ 0.92
CDC42BPB-206ENST00000559790 CLUHO75153 1309 aa20.77■□□□□ 0.91
CDC42BPB-206ENST00000559790 WDR87Q6ZQQ6 2873 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 COL4A2P08572 1712 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 TGM5O43548 720 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 GLUD1P00367 558 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 PRKCBP05771 671 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 TUSC3Q13454 348 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 NT5DC1Q5TFE4 455 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 PRSS55Q6UWB4 352 aaPredicted RBP20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 CD300LGQ6UXG3 332 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 TAS1R3Q7RTX0 852 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 IGSF22Q8N9C0 903 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 HASPINQ8TF76 798 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 MYADMQ96S97 322 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 WDR6Q9NNW5 1121 aaKnown RBP20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 SNTG2Q9NY99 539 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 FNIP2Q9P278 1114 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 PARP2Q9UGN5 583 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 PCDHB6Q9Y5E3 794 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 GVINP1Q7Z2Y8 2422 aa20.76■□□□□ 0.91
CDC42BPB-206ENST00000559790 CCDC195A0A1B0GUA6 201 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 CASTOR2A6NHX0 329 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 PP2D1A8MPX8 630 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 ACKR2O00590 384 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 NPR3P17342 541 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 MUTP22033 750 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 MAPK7Q13164 816 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 HSP90AA2PQ14568 343 aaPredicted RBP20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 SAFBQ15424 915 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 KCNK18Q7Z418 384 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 PLCD3Q8N3E9 789 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 TMEM87AQ8NBN3 555 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 MMTAG2Q9BU76 263 aaKnown RBP20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 COLEC11Q9BWP8 271 aa20.75■□□□□ 0.91
CDC42BPB-206ENST00000559790 CACNA1IQ9P0X4 2223 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 ARHGEF35A5YM69 484 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 N4BP3O15049 544 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 MEFVO15553 781 aaPredicted RBP20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 ADAM12O43184 909 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 NARSO43776 548 aaKnown RBP20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 TRAPPC10P48553 1259 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 HMGN5P82970 282 aaKnown RBP20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 NCBP1Q09161 790 aaKnown RBP20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 PRPF4BQ13523 1007 aaKnown RBP20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 USP41Q3LFD5 358 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 OTOP3Q7RTS5 596 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 PALB2Q86YC2 1186 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 GLYCTKQ8IVS8 523 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 ZBTB8OSQ8IWT0 167 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 RSAD2Q8WXG1 361 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 RIN2Q8WYP3 895 aaPredicted RBP20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 PRRX2Q99811 253 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 C2orf40Q9H1Z8 148 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 BHMT2Q9H2M3 363 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 KCNK12Q9HB15 430 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 DUSP12Q9UNI6 340 aa20.74■□□□□ 0.91
CDC42BPB-206ENST00000559790 ABLIM1O14639 778 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 GALR2O43603 387 aaPredicted RBP20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 CD2BP2O95400 341 aaKnown RBP20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 C1RP00736 705 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 HACE1Q8IYU2 909 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 CEP120Q8N960 986 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 HDAC7Q8WUI4 952 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 PIK3R5Q8WYR1 880 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 PPP1R10Q96QC0 940 aaKnown RBP20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 CLSTN3Q9BQT9 956 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 NT5C3AQ9H0P0 336 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 SH2B1Q9NRF2 756 aaPredicted RBP20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 EPS15L1Q9UBC2 864 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 FBXW11Q9UKB1 542 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 SSX2IPQ9Y2D8 614 aa20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 SF3B1O75533 1304 aaKnown RBP eCLIP20.73■□□□□ 0.91
CDC42BPB-206ENST00000559790 CCT6AP40227 531 aaKnown RBP20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 RBM25P49756 843 aaKnown RBP20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 PTGDRQ13258 359 aa20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 MAPK6Q16659 721 aa20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 HAUS3Q68CZ6 603 aa20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 C3orf58Q8NDZ4 430 aa20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 ERMNQ8TAM6 284 aa20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 LNX1Q8TBB1 728 aaPredicted RBP20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 SMG7Q92540 1137 aaKnown RBP20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 ZSCAN31Q96LW9 406 aaPredicted RBP20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 RUSC1Q9BVN2 902 aa20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 DDX19AQ9NUU7 478 aaKnown RBP20.72■□□□□ 0.91
CDC42BPB-206ENST00000559790 ZNF292O60281 2723 aa20.71■□□□□ 0.91
CDC42BPB-206ENST00000559790 SOX4Q06945 474 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms