RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 FAM160A2Q8N612 972 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 FANCBQ8NB91 859 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 TMC2Q8TDI7 906 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 COLEC11Q9BWP8 271 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 V9GY48 417 aaPredicted RBP10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 CNTNAP2Q9UHC6 1331 aa10.04□□□□□ -0.8
SNRPA1-208ENST00000559686 FAM208BQ5VWN6 2430 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 SHISA7A6NL88 538 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 DDX11L8A8MPP1 907 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 NR1I2O75469 434 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 SRGAP2CP0DJJ0 459 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 CLK2P49760 499 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 CCR3P51677 355 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 SETQ01105 290 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 FOXC1Q12948 553 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 HDAC1Q13547 482 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 TARBP2Q15633 366 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 USP41Q3LFD5 358 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 TANGO2Q6ICL3 276 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 PSAPL1Q6NUJ1 521 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 ZNF410Q86VK4 478 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 RNF168Q8IYW5 571 aaPredicted RBP10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 SLC7A14Q8TBB6 771 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 EIF2AQ9BY44 585 aaKnown RBP10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 ARRDC1-AS1Q9H2J1 176 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 CHRDQ9H2X0 955 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 UNC45AQ9H3U1 944 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 SMOC1Q9H4F8 434 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 OSBPL3Q9H4L5 887 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 BRD9Q9H8M2 597 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 MINDY3Q9H8M7 445 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 FBXW11Q9UKB1 542 aa10.03□□□□□ -0.8
SNRPA1-208ENST00000559686 ADAM12O43184 909 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 EIF5BO60841 1220 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 GAS7O60861 476 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 XYLBO75191 536 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 TADA2AO75478 443 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 PAPLNO95428 1278 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 EFEMP2O95967 443 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 MCM5P33992 734 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 CXCL12P48061 93 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 PABPC1LQ4VXU2 614 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 RTP2Q5QGT7 225 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 STPG1Q5TH74 334 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 PLA2G4FQ68DD2 849 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 SMG8Q8ND04 991 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 FAM3CQ92520 227 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 CPB2Q96IY4 423 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 ARID3AQ99856 593 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 IFT122Q9HBG6 1241 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 KLK14Q9P0G3 267 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 FNIP2Q9P278 1114 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 DNMT3BQ9UBC3 853 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 ADAM28Q9UKQ2 775 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 LHX6Q9UPM6 363 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 MRPS23Q9Y3D9 190 aaKnown RBP10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 IPPQ9Y573 584 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 NOTCH4Q99466 2003 aa10.02□□□□□ -0.81
SNRPA1-208ENST00000559686 GREB1Q4ZG55 1949 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 GIPC1O14908 333 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 KCNK5O95279 499 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 TOP3BO95985 862 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 CYP3A4P08684 503 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 HNRNPA1P09651 372 aaKnown RBP eCLIP10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 CEBPBP17676 345 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 CDC42EP1Q00587 391 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 RING1Q06587 406 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 DSC1Q08554 894 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 GAS6Q14393 721 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 PSMD5Q16401 504 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 AXDND1Q5T1B0 1012 aaPredicted RBP10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 SYNE3Q6ZMZ3 975 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 MIER3Q7Z3K6 550 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 TMTC2Q8N394 836 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 CRYGNQ8WXF5 182 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 MAP4K1Q92918 833 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 TMEM143Q96AN5 459 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 TMEM87BQ96K49 555 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 MBOAT7Q96N66 472 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 CEP89Q96ST8 783 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 CLSTN3Q9BQT9 956 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 PAAF1Q9BRP4 392 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 RBM12Q9NTZ6 932 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 BARHL2Q9NY43 387 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 NAP1L2Q9ULW6 460 aaPredicted RBP10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 COL4A3BPQ9Y5P4 624 aa10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 RBM8AQ9Y5S9 174 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 PDCD11Q14690 1871 aaKnown RBP10.01□□□□□ -0.81
SNRPA1-208ENST00000559686 COL4A2P08572 1712 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 SOBPA7XYQ1 873 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 MAN2B1O00754 1011 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 NRG2O14511 850 aaPredicted RBP10□□□□□ -0.81
SNRPA1-208ENST00000559686 TM4SF5O14894 197 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 MSH4O15457 936 aa10□□□□□ -0.81
SNRPA1-208ENST00000559686 MAFO75444 373 aaPredicted RBP10□□□□□ -0.81
SNRPA1-208ENST00000559686 ECI2O75521 394 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms