RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 CCDC105Q8IYK2 499 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 NSUN7Q8NE18 718 aaKnown RBP14.52□□□□□ -0.09
TPM1-220ENST00000559556 PIGOQ8TEQ8 1089 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 B3GALT6Q96L58 329 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 MYADMQ96S97 322 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 RTP3Q9BQQ7 232 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 ZDHHC7Q9NXF8 308 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 FBXL21Q9UKT6 434 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 TSC2P49815 1807 aa14.52□□□□□ -0.09
TPM1-220ENST00000559556 TPRP12270 2363 aaKnown RBP14.51□□□□□ -0.09
TPM1-220ENST00000559556 BTBD18B2RXH4 712 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 TGM5O43548 720 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 USO1O60763 962 aaKnown RBP14.51□□□□□ -0.09
TPM1-220ENST00000559556 GBP2P32456 591 aaPredicted RBP14.51□□□□□ -0.09
TPM1-220ENST00000559556 TXKP42681 527 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 FAM187BQ17R55 369 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 LILRA6Q6PI73 481 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 CDR2LQ86X02 465 aaPredicted RBP14.51□□□□□ -0.09
TPM1-220ENST00000559556 DIS3L2Q8IYB7 885 aaKnown RBP14.51□□□□□ -0.09
TPM1-220ENST00000559556 SIX5Q8N196 739 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 NECAB1Q8N987 351 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 MCPH1Q8NEM0 835 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 NXPE3Q969Y0 559 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 SNX27Q96L92 541 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 NT5C3AQ9H0P0 336 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 PRMT7Q9NVM4 692 aaPredicted RBP14.51□□□□□ -0.09
TPM1-220ENST00000559556 WNT16Q9UBV4 365 aa14.51□□□□□ -0.09
TPM1-220ENST00000559556 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.099e-6■■■■■ 68.9
TPM1-220ENST00000559556 LRRIQ4A6NIV6 560 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 PI15O43692 258 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 SPATA31D3P0C874 917 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 SPATA31C1P0DKV0 1188 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 HSP90AA2PQ14568 343 aaPredicted RBP14.5□□□□□ -0.09
TPM1-220ENST00000559556 SPATA31D4Q6ZUB0 917 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 FRMD5Q7Z6J6 570 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 PALB2Q86YC2 1186 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 RSAD2Q8WXG1 361 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 RIN2Q8WYP3 895 aaPredicted RBP14.5□□□□□ -0.09
TPM1-220ENST00000559556 PAAF1Q9BRP4 392 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 PRKD2Q9BZL6 878 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 TUFT1Q9NNX1 390 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 GPRC5CQ9NQ84 441 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.5□□□□□ -0.09
TPM1-220ENST00000559556 KLK14Q9P0G3 267 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 NCOR2Q9Y618 2525 aa14.5□□□□□ -0.09
TPM1-220ENST00000559556 SCN1AP35498 2009 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 KRBA1A5PL33 1030 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 CFHP08603 1231 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 MYBP10242 640 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 SRFP11831 508 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 RPL17P18621 184 aaKnown RBP14.49□□□□□ -0.09
TPM1-220ENST00000559556 TUSC3Q13454 348 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 HTR4Q13639 388 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 ANGPT1Q15389 498 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 RTP2Q5QGT7 225 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 GLYCTKQ8IVS8 523 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 SLC44A3Q8N4M1 653 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 DTWD2Q8NBA8 298 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 NKD2Q969F2 451 aaPredicted RBP14.49□□□□□ -0.09
TPM1-220ENST00000559556 TMEM60Q9H2L4 133 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 FZD8Q9H461 694 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 PIDD1Q9HB75 910 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 CACNG4Q9UBN1 327 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 PARP2Q9UGN5 583 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 FBXW11Q9UKB1 542 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 ATG2BQ96BY7 2078 aa14.49□□□□□ -0.09
TPM1-220ENST00000559556 A0A087WWV3 80 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 TTLL13PA6NNM8 815 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 ANHXE9PGG2 379 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 PTGESO14684 152 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 N4BP3O15049 544 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 JAK2O60674 1132 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 ZMYND10O75800 440 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 LAMP2P13473 410 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 TRIM29Q14134 588 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 NAB2Q15742 525 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 POTEGQ6S5H5 508 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 GET4Q7L5D6 327 aaPredicted RBP14.48□□□□□ -0.09
TPM1-220ENST00000559556 CATSPER3Q86XQ3 398 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 ZBTB8OSQ8IWT0 167 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 PIK3R5Q8WYR1 880 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 RABGGTAQ92696 567 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 POLR3CQ9BUI4 534 aaPredicted RBP14.48□□□□□ -0.09
TPM1-220ENST00000559556 CCDC113Q9H0I3 377 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 C2orf40Q9H1Z8 148 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 PDZD7Q9H5P4 517 aa14.48□□□□□ -0.09
TPM1-220ENST00000559556 ZFP37Q9Y6Q3 630 aaPredicted RBP14.48□□□□□ -0.09
TPM1-220ENST00000559556 MED24O75448 989 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 TADA2AO75478 443 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 RECQL4O94761 1208 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 KIF4AO95239 1232 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 CENPBP07199 599 aaPredicted RBP14.47□□□□□ -0.09
TPM1-220ENST00000559556 ATP2B1P20020 1258 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 FOSBP53539 338 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 ORC2Q13416 577 aaPredicted RBP14.47□□□□□ -0.09
TPM1-220ENST00000559556 PSMD5Q16401 504 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 PRSS55Q6UWB4 352 aaPredicted RBP14.47□□□□□ -0.09
TPM1-220ENST00000559556 HASPINQ8TF76 798 aa14.47□□□□□ -0.09
TPM1-220ENST00000559556 BSNDQ8WZ55 320 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms