RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 EFNA5P52803 228 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 C4orf32Q8N8J7 132 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 HDAC7Q8WUI4 952 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 RIN2Q8WYP3 895 aaPredicted RBP16.48■□□□□ 0.23
LRRC28-213ENST00000559399 STAMQ92783 540 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 KIFAP3Q92845 792 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 IFT74Q96LB3 600 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 KIFC3Q9BVG8 833 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 RAB34Q9BZG1 259 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 PLEKHA4Q9H4M7 779 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 SNTG2Q9NY99 539 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 LRWD1Q9UFC0 647 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 STK24Q9Y6E0 443 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 PIEZO1Q92508 2521 aa16.48■□□□□ 0.23
LRRC28-213ENST00000559399 PTGESO14684 152 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 TGM5O43548 720 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 RFPL2O75678 378 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 MYBP10242 640 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 U2AF2P26368 475 aaKnown RBP eCLIP16.47■□□□□ 0.23
LRRC28-213ENST00000559399 NUBP1P53384 320 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 ECM1Q16610 540 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 DCAF4L1Q3SXM0 396 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 PALB2Q86YC2 1186 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 SNX29Q8TEQ0 813 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 PAAF1Q9BRP4 392 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 MFSD1Q9H3U5 465 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 WDR6Q9NNW5 1121 aaKnown RBP16.47■□□□□ 0.23
LRRC28-213ENST00000559399 DDX19AQ9NUU7 478 aaKnown RBP16.47■□□□□ 0.23
LRRC28-213ENST00000559399 ZDHHC7Q9NXF8 308 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 FNIP2Q9P278 1114 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 CACNG4Q9UBN1 327 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
LRRC28-213ENST00000559399 KIAA1024Q9UPX6 916 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 USP20Q9Y2K6 914 aa16.47■□□□□ 0.23
LRRC28-213ENST00000559399 CLUHO75153 1309 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 ZNF318Q5VUA4 2279 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 KIF4AO95239 1232 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 EDN1P05305 212 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 THP07101 528 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 SPATA31D3P0C874 917 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 PTGDRQ13258 359 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 TDGQ13569 410 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 PDIA5Q14554 519 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 C8orf34Q49A92 452 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 RTP2Q5QGT7 225 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 EEF1DP3Q658K8 133 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 SPATA31D4Q6ZUB0 917 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 IGSF22Q8N9C0 903 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 HASPINQ8TF76 798 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 SMG7Q92540 1137 aaKnown RBP16.46■□□□□ 0.23
LRRC28-213ENST00000559399 IRF2BPLQ9H1B7 796 aa16.46■□□□□ 0.23
LRRC28-213ENST00000559399 LAD1O00515 517 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 PAPLNO95428 1278 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 RPL17P18621 184 aaKnown RBP16.45■□□□□ 0.22
LRRC28-213ENST00000559399 GBP2P32456 591 aaPredicted RBP16.45■□□□□ 0.22
LRRC28-213ENST00000559399 TOB1P50616 345 aaPredicted RBP16.45■□□□□ 0.22
LRRC28-213ENST00000559399 ATF7IP2Q5U623 682 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 PRSS55Q6UWB4 352 aaPredicted RBP16.45■□□□□ 0.22
LRRC28-213ENST00000559399 APBB1IPQ7Z5R6 666 aaPredicted RBP16.45■□□□□ 0.22
LRRC28-213ENST00000559399 GLYCTKQ8IVS8 523 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 ZNF707Q96C28 371 aaPredicted RBP16.45■□□□□ 0.22
LRRC28-213ENST00000559399 PHOX2BQ99453 314 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 TTPALQ9BTX7 342 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 KCNK12Q9HB15 430 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 PIDD1Q9HB75 910 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 IGSF9Q9P2J2 1179 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 DUSP12Q9UNI6 340 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 GDAQ9Y2T3 454 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 PCDHB6Q9Y5E3 794 aa16.45■□□□□ 0.22
LRRC28-213ENST00000559399 GALR2O43603 387 aaPredicted RBP16.44■□□□□ 0.22
LRRC28-213ENST00000559399 N4BP1O75113 896 aaKnown RBP16.44■□□□□ 0.22
LRRC28-213ENST00000559399 ELAVL2Q12926 359 aaKnown RBP16.44■□□□□ 0.22
LRRC28-213ENST00000559399 NAB2Q15742 525 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 NT5DC1Q5TFE4 455 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 FAM171A1Q5VUB5 890 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 KRT79Q5XKE5 535 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
LRRC28-213ENST00000559399 LILRA6Q6PI73 481 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 CEP57Q86XR8 500 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 TMEM105Q8N8V8 129 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 PIK3R5Q8WYR1 880 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 NT5C3AQ9H0P0 336 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 CXCL16Q9H2A7 254 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 POLD4Q9HCU8 107 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 EPS15L1Q9UBC2 864 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 DNM3Q9UQ16 869 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 PHLPP2Q6ZVD8 1323 aa16.44■□□□□ 0.22
LRRC28-213ENST00000559399 PP2D1A8MPX8 630 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 K7ERI5 159 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 PRPHP41219 470 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 DMP1Q13316 513 aaPredicted RBP16.43■□□□□ 0.22
LRRC28-213ENST00000559399 RABEP1Q15276 862 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 PSMD5Q16401 504 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 GLRA4Q5JXX5 417 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 LIN9Q5TKA1 542 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 PDXDC1Q6P996 788 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 DTHD1Q6ZMT9 781 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 ATOH1Q92858 354 aaPredicted RBP16.43■□□□□ 0.22
LRRC28-213ENST00000559399 PRKD2Q9BZL6 878 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms