RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 GOLGA8JA6NMD2 632 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 TBKBP1A7MCY6 615 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 CLIC2O15247 247 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 DDHD2O94830 711 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 EOMESO95936 686 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 ADRB2P07550 413 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 STAG3L1P0CL83 205 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 CXCL8P10145 99 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 ITGA4P13612 1032 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 GRM5P41594 1212 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 ACOT2P49753 483 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 FXR1P51114 621 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM1-217ENST00000559108 SCNN1GP51170 649 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 SOX4Q06945 474 aaPredicted RBP11.91□□□□□ -0.5
TPM1-217ENST00000559108 SPAG1Q07617 926 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 PSMD2Q13200 908 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 ALCAMQ13740 583 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 KNOP1Q1ED39 458 aaKnown RBP11.91□□□□□ -0.5
TPM1-217ENST00000559108 TMEM132AQ24JP5 1023 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 DCAF4L1Q3SXM0 396 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 GLRA4Q5JXX5 417 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 ZNF658Q5TYW1 1059 aaPredicted RBP11.91□□□□□ -0.5
TPM1-217ENST00000559108 ALKAL1Q6UXT8 129 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 TMEM173Q86WV6 379 aaPredicted RBP11.91□□□□□ -0.5
TPM1-217ENST00000559108 SLC17A8Q8NDX2 589 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 BCL7CQ8WUZ0 217 aaPredicted RBP11.91□□□□□ -0.5
TPM1-217ENST00000559108 SNX27Q96L92 541 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 GSDMAQ96QA5 445 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 YME1L1Q96TA2 773 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 RAD9AQ99638 391 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 C17orf80Q9BSJ5 609 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 TMEM117Q9H0C3 514 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 CERS4Q9HA82 394 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 RSAD1Q9HA92 442 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 TBC1D13Q9NVG8 400 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 DNAJB4Q9UDY4 337 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 KCNG1Q9UIX4 513 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 CPSF3Q9UKF6 684 aaKnown RBP11.91□□□□□ -0.5
TPM1-217ENST00000559108 PCDHB13Q9Y5F0 798 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 VWA8A3KMH1 1905 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 TSC2P49815 1807 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 PTPRJQ12913 1337 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 CLDN3O15551 220 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 POMCP01189 267 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 CASP4P49662 377 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 DPCR1Q3MIW9 517 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 XKR4Q5GH76 650 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 CBWD2Q8IUF1 395 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 CMTR2Q8IYT2 770 aaKnown RBP11.9□□□□□ -0.5
TPM1-217ENST00000559108 SYCP3Q8IZU3 236 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 ADSSL1Q8N142 457 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 GUF1Q8N442 669 aaKnown RBP11.9□□□□□ -0.5
TPM1-217ENST00000559108 PLEKHO2Q8TD55 490 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 RABGGTAQ92696 567 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 PAAF1Q9BRP4 392 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 TCHPQ9BT92 498 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 ZBED2Q9BTP6 218 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 MSTO1Q9BUK6 570 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 GBP3Q9H0R5 595 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 TYW1Q9NV66 732 aaKnown RBP11.9□□□□□ -0.5
TPM1-217ENST00000559108 LRFN2Q9ULH4 789 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 INSL6Q9Y581 213 aa11.9□□□□□ -0.5
TPM1-217ENST00000559108 SCN1AP35498 2009 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 TTC26A0AVF1 554 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 GOLGA6L22H0YM25 854 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 RFXAPO00287 272 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 OGTO15294 1046 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 SMC2O95347 1197 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 SCP2P22307 547 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 GUCY2FP51841 1108 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 DSC1Q08554 894 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 NCBP1Q09161 790 aaKnown RBP11.89□□□□□ -0.51
TPM1-217ENST00000559108 BTG3Q14201 252 aaPredicted RBP11.89□□□□□ -0.51
TPM1-217ENST00000559108 COBLL1Q53SF7 1204 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 NOMO2Q5JPE7 1267 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 Q7L0L9 218 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 EFCAB13Q8IY85 973 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 POMGNT1Q8WZA1 660 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 C18orf25Q96B23 403 aaPredicted RBP11.89□□□□□ -0.51
TPM1-217ENST00000559108 TIFAQ96CG3 184 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 EEF2KMTQ96G04 330 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
TPM1-217ENST00000559108 ADPGKQ9BRR6 497 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 VN1R3Q9BXE9 311 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 TRIM6Q9C030 488 aaPredicted RBP11.89□□□□□ -0.51
TPM1-217ENST00000559108 NRDE2Q9H7Z3 1164 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 GOLGA2P5Q9HBQ8 144 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 DMAC2Q9NW81 257 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 PARP2Q9UGN5 583 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 AGO2Q9UKV8 859 aaKnown RBP11.89□□□□□ -0.51
TPM1-217ENST00000559108 MTUS1Q9ULD2 1270 aa11.89□□□□□ -0.51
TPM1-217ENST00000559108 LACTBL1A8MY62 500 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 LPXNO60711 386 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 MBD3O95983 291 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 ITGB1P05556 798 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 NFICP08651 508 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 SKIP12755 728 aa11.88□□□□□ -0.51
TPM1-217ENST00000559108 GARTP22102 1010 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms