RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 KLHL5Q96PQ7 755 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 CCSER1Q9C0I3 900 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 ZSCAN16Q9H4T2 348 aaPredicted RBP19.34■□□□□ 0.69
SMAD3-210ENST00000559092 CHST7Q9NS84 486 aa19.34■□□□□ 0.69
SMAD3-210ENST00000559092 LARSQ9P2J5 1176 aaKnown RBP19.34■□□□□ 0.69
SMAD3-210ENST00000559092 SFI1A8K8P3 1242 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 H0YCG3 227 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 PTGESO14684 152 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 SLC16A4O15374 487 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 DCXO43602 365 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 GPR37L1O60883 481 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 BRD1O95696 1058 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 CNPP09543 421 aaKnown RBP19.33■□□□□ 0.68
SMAD3-210ENST00000559092 KLRC2P26717 231 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 GLUD2P49448 558 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 DSG1Q02413 1049 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 STRN3Q13033 797 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 PTPAQ15257 358 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 TAS1R3Q7RTX0 852 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 TMEM161BQ8NDZ6 487 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 RXFP1Q9HBX9 757 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 ADAM28Q9UKQ2 775 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 ODF2LQ9ULJ1 636 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 MTMR6Q9Y217 621 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 CLIC4Q9Y696 253 aa19.33■□□□□ 0.68
SMAD3-210ENST00000559092 MORC2Q9Y6X9 1032 aaPredicted RBP19.33■□□□□ 0.68
SMAD3-210ENST00000559092 TADA2AO75478 443 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 MCF2P10911 925 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 PDIA4P13667 645 aaKnown RBP19.32■□□□□ 0.68
SMAD3-210ENST00000559092 PROZP22891 400 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 GRM5P41594 1212 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 GRIN1Q05586 938 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 RAD51AP2Q09MP3 1159 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
SMAD3-210ENST00000559092 USP41Q3LFD5 358 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 KIAA1841Q6NSI8 718 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 TAS1R1Q7RTX1 841 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 RASSF8Q8NHQ8 419 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 CCDC94Q9BW85 323 aaPredicted RBP19.32■□□□□ 0.68
SMAD3-210ENST00000559092 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMAD3-210ENST00000559092 TOPORSQ9NS56 1045 aaPredicted RBP19.32■□□□□ 0.68
SMAD3-210ENST00000559092 BLOC1S4Q9NUP1 217 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 DPP7Q9UHL4 492 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 GDAQ9Y2T3 454 aa19.32■□□□□ 0.68
SMAD3-210ENST00000559092 SRPRBQ9Y5M8 271 aaKnown RBP19.32■□□□□ 0.68
SMAD3-210ENST00000559092 STX6O43752 255 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 TOM1L1O75674 476 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 ADH1AP07327 375 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 MAPTP10636 758 aaKnown RBP19.31■□□□□ 0.68
SMAD3-210ENST00000559092 EPCAMP16422 314 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 DDIT3P35638 169 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 MTHFRP42898 656 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 CLCN4P51793 760 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 YARSP54577 528 aaKnown RBP19.31■□□□□ 0.68
SMAD3-210ENST00000559092 NAB2Q15742 525 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 TMEM31Q5JXX7 168 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 FUT10Q6P4F1 479 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 ZPBP2Q6X784 338 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 RNF135Q8IUD6 432 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 RAD54LQ92698 747 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 FBXL18Q96ME1 805 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 RIPOR3Q96MK2 946 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 TCHPQ9BT92 498 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 TARS2Q9BW92 718 aaKnown RBP19.31■□□□□ 0.68
SMAD3-210ENST00000559092 GPR62Q9BZJ7 368 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 CDT1Q9H211 546 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 C5orf42Q9H799 3197 aa19.31■□□□□ 0.68
SMAD3-210ENST00000559092 SF3B1O75533 1304 aaKnown RBP eCLIP19.3■□□□□ 0.68
SMAD3-210ENST00000559092 F8W810 466 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 PLCG1P19174 1290 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 CREMQ03060 361 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 ELAVL2Q12926 359 aaKnown RBP19.3■□□□□ 0.68
SMAD3-210ENST00000559092 KARSQ15046 597 aaKnown RBP19.3■□□□□ 0.68
SMAD3-210ENST00000559092 ZNF568Q3ZCX4 644 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 XKR4Q5GH76 650 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 HERC4Q5GLZ8 1057 aaPredicted RBP19.3■□□□□ 0.68
SMAD3-210ENST00000559092 ATAT1Q5SQI0 421 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 ELMSAN1Q6PJG2 1045 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 MPZL3Q6UWV2 235 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 ALKAL1Q6UXT8 129 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 GPBP1Q86WP2 473 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 FNIP2Q9P278 1114 aa19.3■□□□□ 0.68
SMAD3-210ENST00000559092 FBXO2Q9UK22 296 aaPredicted RBP19.3■□□□□ 0.68
SMAD3-210ENST00000559092 NPHP3-ACAD11A0A0J9YXS1 232 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 C2CD2LO14523 706 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 ABLIM1O14639 778 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 TEX28O15482 410 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 ABCD1P33897 745 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 ZNF131P52739 623 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 HDAC7Q8WUI4 952 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 EPSTI1Q96J88 318 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 RPGRIP1Q96KN7 1286 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 UROC1Q96N76 676 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 ACAP3Q96P50 834 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 PPP1R10Q96QC0 940 aaKnown RBP19.29■□□□□ 0.68
SMAD3-210ENST00000559092 REEP2Q9BRK0 252 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 PAAF1Q9BRP4 392 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 APOL5Q9BWW9 433 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 SFXN1Q9H9B4 322 aa19.29■□□□□ 0.68
SMAD3-210ENST00000559092 PARVGQ9HBI0 331 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms