RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 XKR4Q5GH76 650 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 NOMO2Q5JPE7 1267 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 CRELD2Q6UXH1 353 aaPredicted RBP12.53□□□□□ -0.4
SNX1-204ENST00000559061 FIBCD1Q8N539 461 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 ZNF507Q8TCN5 953 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 ARNTL2Q8WYA1 636 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 HVCN1Q96D96 273 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 TIGD1Q96MW7 591 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 ZMAT2Q96NC0 199 aaKnown RBP12.53□□□□□ -0.4
SNX1-204ENST00000559061 TGS1Q96RS0 853 aaKnown RBP12.53□□□□□ -0.4
SNX1-204ENST00000559061 CDX2Q99626 313 aaPredicted RBP12.53□□□□□ -0.4
SNX1-204ENST00000559061 VN1R3Q9BXE9 311 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 LRRC27Q9C0I9 530 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 NRDE2Q9H7Z3 1164 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 SLC39A2Q9NP94 309 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 ANKFY1Q9P2R3 1169 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 INPP5FQ9Y2H2 1132 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 GDAQ9Y2T3 454 aa12.53□□□□□ -0.4
SNX1-204ENST00000559061 H0YCG3 227 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 HNRNPDLO14979 420 aaKnown RBP12.52□□□□□ -0.41
SNX1-204ENST00000559061 RHOBTB3O94955 611 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 EFEMP2O95967 443 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 POMCP01189 267 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 HARSP12081 509 aaKnown RBP12.52□□□□□ -0.41
SNX1-204ENST00000559061 BMPR1AP36894 532 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 OSTNP61366 133 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 STRN3Q13033 797 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 COLGALT2Q8IYK4 626 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 LRRC43Q8N309 656 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 COLGALT1Q8NBJ5 622 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 MYLIPQ8WY64 445 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 PGBD4Q96DM1 585 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 SNX27Q96L92 541 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 PAAF1Q9BRP4 392 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 CBWD1Q9BRT8 395 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 MARCH5Q9NX47 278 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 KCNG1Q9UIX4 513 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 GIT1Q9Y2X7 761 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 VWA8A3KMH1 1905 aa12.52□□□□□ -0.41
SNX1-204ENST00000559061 GRM6O15303 877 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 EIF3DO15371 548 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNX1-204ENST00000559061 HOXA2O43364 376 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 ITGB1P05556 798 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 MYL1P05976 194 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 ADRB2P07550 413 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 CXCL8P10145 99 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 BMP6P22004 513 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 SCP2P22307 547 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 CTNNB1P35222 781 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 SLC11A1P49279 550 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 LIG4P49917 911 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 SOX4Q06945 474 aaPredicted RBP12.51□□□□□ -0.41
SNX1-204ENST00000559061 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
SNX1-204ENST00000559061 SCARA3Q6AZY7 606 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 GLB1LQ6UWU2 654 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 CD300LGQ6UXG3 332 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 THNSL1Q8IYQ7 743 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 SLC17A8Q8NDX2 589 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 GPT2Q8TD30 523 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 PPP1R10Q96QC0 940 aaKnown RBP12.51□□□□□ -0.41
SNX1-204ENST00000559061 ACCSQ96QU6 501 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 TRIM6Q9C030 488 aaPredicted RBP12.51□□□□□ -0.41
SNX1-204ENST00000559061 KCTD10Q9H3F6 313 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 CPSF3Q9UKF6 684 aaKnown RBP12.51□□□□□ -0.41
SNX1-204ENST00000559061 PCDHA5Q9Y5H7 936 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 PRUNE2Q8WUY3 3088 aa12.51□□□□□ -0.41
SNX1-204ENST00000559061 SPTBN5Q9NRC6 3674 aaKnown RBP12.5□□□□□ -0.41
SNX1-204ENST00000559061 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
SNX1-204ENST00000559061 GOLGA6L4A6NEF3 574 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 H3BNC9 293 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 CLDN3O15551 220 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 GALTP07902 379 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 BCAR1P56945 870 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 NCBP1Q09161 790 aaKnown RBP12.5□□□□□ -0.41
SNX1-204ENST00000559061 ALCAMQ13740 583 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 KCNB1Q14721 858 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 TMEM132AQ24JP5 1023 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 GLRA4Q5JXX5 417 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 NELFCDQ8IXH7 590 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 ELOA2Q8IYF1 753 aaPredicted RBP12.5□□□□□ -0.41
SNX1-204ENST00000559061 SMYD4Q8IYR2 804 aaPredicted RBP12.5□□□□□ -0.41
SNX1-204ENST00000559061 SLC39A11Q8N1S5 342 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 KLHL23Q8NBE8 558 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 FBXO22Q8NEZ5 403 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 RABGGTAQ92696 567 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 BICD1Q96G01 975 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 FAM84AQ96KN4 292 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 ADPGKQ9BRR6 497 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 GZF1Q9H116 711 aaPredicted RBP12.5□□□□□ -0.41
SNX1-204ENST00000559061 CNTN3Q9P232 1028 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 PARP2Q9UGN5 583 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 PCDHGC5Q9Y5F6 944 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 UBE4BO95155 1302 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 MYO7AQ13402 2215 aa12.5□□□□□ -0.41
SNX1-204ENST00000559061 TSC2P49815 1807 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 TTC26A0AVF1 554 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 NT5C1B-RDH14C9J2C7 533 aa12.49□□□□□ -0.41
SNX1-204ENST00000559061 OGTO15294 1046 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms