RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ZNF558Q96NG5 402 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 PPP1R10Q96QC0 940 aaKnown RBP13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 GPR62Q9BZJ7 368 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 ZBP1Q9H171 429 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 CD320Q9NPF0 282 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 SPG21Q9NZD8 308 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 TBC1D7Q9P0N9 293 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 CDH22Q9UJ99 828 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 TBX20Q9UMR3 447 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 GDAQ9Y2T3 454 aa13.89□□□□□ -0.19
RABGGTA-207ENST00000558936 KLRC4O43908 158 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 MYBP10242 640 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 OSTNP61366 133 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 MRPS5P82675 430 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 TIGD5Q53EQ6 642 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 SPOUT1Q5T280 376 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 CRELD2Q6UXH1 353 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 RBM23Q86U06 439 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 THNSL1Q8IYQ7 743 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 ABI1Q8IZP0 508 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 CNNM3Q8NE01 707 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 HLA-CQ95604 372 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 DHX58Q96C10 678 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 MSLNLQ96KJ4 702 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 FAM84AQ96KN4 292 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 ASB2Q96Q27 587 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 TRIM9Q9C026 710 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 ST6GALNAC4Q9H4F1 302 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 UBE2ZQ9H832 354 aaPredicted RBP13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 PARVGQ9HBI0 331 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 GOLGA2P5Q9HBQ8 144 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 AAASQ9NRG9 546 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 PARP2Q9UGN5 583 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 COG5Q9UP83 839 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 LZTS1Q9Y250 596 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 RBM19Q9Y4C8 960 aaKnown RBP13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 PCDHB12Q9Y5F1 795 aa13.88□□□□□ -0.19
RABGGTA-207ENST00000558936 ZMYM2Q9UBW7 1377 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 SCN1AP35498 2009 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 A0A1B0GVL5 298 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 C2orf71A6NGG8 1288 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 H3BQ06 376 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 POLR2DO15514 142 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 GRM5P41594 1212 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 STAT6P42226 847 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 MCL1Q07820 350 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 PLPP4Q5VZY2 271 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 ATL3Q6DD88 541 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 KANK3Q6NY19 840 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 MPZL3Q6UWV2 235 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 DDX53Q86TM3 631 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 MAP4K3Q8IVH8 894 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 TCF25Q9BQ70 676 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 MRPL9Q9BYD2 267 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 MRPL4Q9BYD3 311 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 BLZF1Q9H2G9 400 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 TLR9Q9NR96 1032 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 CCDC39Q9UFE4 941 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 SERTAD1Q9UHV2 236 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 PRG3Q9Y2Y8 225 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 STYXL1Q9Y6J8 313 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 C2orf16Q68DN1 1984 aa13.87□□□□□ -0.19
RABGGTA-207ENST00000558936 SMIM28A0A1B0GU29 152 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 GRXCR2A6NFK2 248 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 CASTOR2A6NHX0 329 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 DLL1O00548 723 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 TOM1L1O75674 476 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 FAM13AO94988 1023 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 ADRB2P07550 413 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 PDIA4P13667 645 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 PFKFB1P16118 471 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 NRIP1P48552 1158 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 UBE3AQ05086 875 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 SPAG1Q07617 926 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 NCBP1Q09161 790 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 CUL4BQ13620 913 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 ZBTB6Q15916 424 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 DUSP6Q16828 381 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 CSPP1Q1MSJ5 1256 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 TJAP1Q5JTD0 557 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 KIAA0319Q5VV43 1072 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 CNNM4Q6P4Q7 775 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 ZPBP2Q6X784 338 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 CCDC73Q6ZRK6 1079 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 SV2BQ7L1I2 683 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 EPM2AIP1Q7L775 607 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 VPS52Q8N1B4 723 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 MRPL43Q8N983 215 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 KHSRPQ92945 711 aaKnown RBP eCLIP13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 C18orf25Q96B23 403 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 PABPC5Q96DU9 382 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 SNX27Q96L92 541 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 C7orf25Q9BPX7 421 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 TMEM175Q9BSA9 504 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 IGFLR1Q9H665 355 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 CHST7Q9NS84 486 aa13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 LARSQ9P2J5 1176 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-207ENST00000558936 MTCL1Q9Y4B5 1905 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms