RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 FAM213AQ9BRX8 229 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 TAOK3Q9H2K8 898 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 COL20A1Q9P218 1284 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 GABBR1Q9UBS5 961 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 PCDHA2Q9Y5H9 948 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 MYH7BA7E2Y1 1941 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 TRAPPC3O43617 180 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 GAP43P17677 238 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 PCK1P35558 622 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 RAB27AP51159 221 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 RPS6KA3P51812 740 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 CXCL9Q07325 125 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 CUL1Q13616 776 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 RBBP5Q15291 538 aaKnown RBP12.99□□□□□ -0.33
SEC11A-206ENST00000558924 LLGL2Q6P1M3 1020 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 TATDN1Q6P1N9 297 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 RNF207Q6ZRF8 634 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 CDR2LQ86X02 465 aaPredicted RBP12.99□□□□□ -0.33
SEC11A-206ENST00000558924 CCT6BQ92526 530 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 KRT35Q92764 455 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 MKL1Q969V6 931 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 ZNF653Q96CK0 615 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.99□□□□□ -0.33
SEC11A-206ENST00000558924 GINS2Q9Y248 185 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 TMX2Q9Y320 296 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 YWHABP31946 246 aaKnown RBP12.99□□□□□ -0.33
SEC11A-206ENST00000558924 ADCY8P40145 1251 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 ACOT2P49753 483 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 NT5C2P49902 561 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 VAMP7P51809 220 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 EPHA7Q15375 998 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 FAM151AQ8WW52 585 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 GMCL1Q96IK5 515 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 PBKQ96KB5 322 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 C9orf72Q96LT7 481 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 FNBP1Q96RU3 617 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 DDX23Q9BUQ8 820 aaKnown RBP12.99□□□□□ -0.33
SEC11A-206ENST00000558924 RPAP3Q9H6T3 665 aaPredicted RBP12.99□□□□□ -0.33
SEC11A-206ENST00000558924 ACTR5Q9H9F9 607 aaPredicted RBP12.99□□□□□ -0.33
SEC11A-206ENST00000558924 KMT5AQ9NQR1 393 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 RNF14Q9UBS8 474 aa12.99□□□□□ -0.33
SEC11A-206ENST00000558924 WNT10BO00744 389 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 ENTPD3O75355 529 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 RNASELQ05823 741 aaKnown RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 BFSP1Q12934 665 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 XRCC4Q13426 336 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 SNRNP48Q6IEG0 339 aaKnown RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 WRNIP1Q96S55 665 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 HERC5Q9UII4 1024 aaKnown RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 LTBP4Q8N2S1 1624 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 ATXN2Q99700 1313 aaKnown RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 SPDYE5A6NIY4 337 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 THAP12O43422 761 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 ZBED4O75132 1171 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 SMNDC1O75940 238 aaKnown RBP eCLIP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 CAP2P40123 477 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 PLCB4Q15147 1175 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 SLC15A2Q16348 729 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 C1orf186Q6ZWK4 172 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 IGSF9BQ9UPX0 1349 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 GOLGA8SH3BPF8 625 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 GOLGA8MH3BSY2 632 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 UBOX5O94941 541 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 SGPL1O95470 568 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 GNAT1P11488 350 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 PECAM1P16284 738 aaPredicted RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 PRLRP16471 622 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 KRT15P19012 456 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 RANBP1P43487 201 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 ZNF131P52739 623 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 RWDD2BP57060 319 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 CDK17Q00537 523 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 KYNUQ16719 465 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 UGCGQ16739 394 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 Q4G0T1 1027 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 NBPF12Q5TAG4 269 aaPredicted RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 PHLDB3Q6NSJ2 640 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 CCDC137Q6PK04 289 aaKnown RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 MAB21L3Q8N8X9 362 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 ARAP2Q8WZ64 1704 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 TMEM143Q96AN5 459 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 WNK4Q96J92 1243 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 HSD17B14Q9BPX1 270 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 NSRP1Q9H0G5 558 aaKnown RBP12.98□□□□□ -0.33
SEC11A-206ENST00000558924 RNF146Q9NTX7 359 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 HSPBP1Q9NZL4 362 aa12.98□□□□□ -0.33
SEC11A-206ENST00000558924 PPP3CAQ08209 521 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 SMAD1Q15797 465 aaKnown RBP12.97□□□□□ -0.33
SEC11A-206ENST00000558924 TMC3Q7Z5M5 1100 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 ARHGEF2Q92974 986 aaKnown RBP12.97□□□□□ -0.33
SEC11A-206ENST00000558924 MXRA8Q9BRK3 442 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 APEX2Q9UBZ4 518 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 SLC12A6Q9UHW9 1150 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 ANKRD33BA6NCL7 494 aa12.97□□□□□ -0.33
SEC11A-206ENST00000558924 F8VZ95 297 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms